LOC118965110


Basic Information

Item Value
gene id LOC118965110
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 74360536 ~ 74360679 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052442.1
CTTCAGTGATGATACGATGACGAGTCGGAACGGGACACTGTGTCTGTGGGCACTGGGTCAGGGTCACGTTCTGTGTCTCTGGGTTCAGTTACCCACAGCAGCGTGTTCTTCAGTTGAAGACATCGAGGCATTTGTCTGAGAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052442.1 True 144 mRNA 0.53 1 74360536 74360679

Neighbor

gene id symbol gene type direction distance location
LOC118965113 NA coding upstream 4930 74355429 ~ 74355606 (+)
LOC118965103 NA coding upstream 40398 74320084 ~ 74320138 (+)
LOC118965102 NA coding upstream 42281 74318201 ~ 74318255 (+)
LOC118965101 NA coding upstream 44581 74315901 ~ 74315955 (+)
LOC118965100 NA coding upstream 46846 74313636 ~ 74313690 (+)
LOC110526565 LOC106562357 coding downstream 2436 74363115 ~ 74378029 (+)
LOC110526567 wee1 coding downstream 29103 74389782 ~ 74395037 (+)
LOC110526568 LOC106587550 coding downstream 34689 74395368 ~ 74430677 (+)
LOC110526569 LOC106562354 coding downstream 82458 74443137 ~ 74463814 (+)
LOC110526570 cyp1a3 coding downstream 144365 74505044 ~ 74509032 (+)
G544591 NA non-coding upstream 26604 74333602 ~ 74333932 (+)
G544586 NA non-coding upstream 35292 74324910 ~ 74325244 (+)
G544580 NA non-coding upstream 43679 74314342 ~ 74316857 (+)
G544521 dennd5a non-coding upstream 61018 74298879 ~ 74299518 (+)
G544571 NA non-coding upstream 64684 74295358 ~ 74295852 (+)
G544754 NA non-coding downstream 105145 74465824 ~ 74466025 (+)
G544756 LOC105416325 non-coding downstream 106948 74467627 ~ 74467972 (+)
G544757 NA non-coding downstream 107585 74468264 ~ 74468808 (+)
G544758 NA non-coding downstream 109303 74469982 ~ 74470458 (+)
G544761 NA non-coding downstream 119479 74480158 ~ 74480412 (+)
G544565 NA other upstream 72398 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 972849 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 1215189 73037953 ~ 73182742 (+)
G542890 NA other upstream 1593685 72765681 ~ 72766851 (+)
saa saa other upstream 1693664 72665460 ~ 72666872 (+)
G545485 NA other downstream 877121 75237800 ~ 75238164 (+)
G545601 NA other downstream 1061182 75421861 ~ 75422752 (+)
G546464 LOC106562315 other downstream 1567549 75928228 ~ 75970674 (+)
LOC110526968 fto other downstream 2526753 76827001 ~ 77038395 (+)
G547884 NA other downstream 2917313 77277992 ~ 77279354 (+)

Expression


Co-expression Network