Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526571 |
| gene name | LOC106562351 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 74509447 ~ 74536436 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| enhancer of mRNA-decapping protein 3-like |
| id | description |
|---|---|
| K12615 | EDC3; enhancer of mRNA-decapping protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036980961.1 | False | 4571 | mRNA | 0.44 | 7 | 74509447 | 74536436 |
| XM_036980962.1 | True | 4190 | mRNA | 0.44 | 8 | 74509447 | 74536436 |
74,484,000
74,488,000
74,492,000
74,496,000
74,500,000
74,504,000
74,508,000
74,512,000
74,516,000
74,520,000
74,524,000
74,528,000
74,532,000
74,536,000
74,540,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526570 | cyp1a3 | coding | upstream | 415 | 74505044 ~ 74509032 (+) |
| LOC110526569 | LOC106562354 | coding | upstream | 45633 | 74443137 ~ 74463814 (+) |
| LOC110526568 | LOC106587550 | coding | upstream | 78770 | 74395368 ~ 74430677 (+) |
| LOC110526567 | wee1 | coding | upstream | 114410 | 74389782 ~ 74395037 (+) |
| LOC110526565 | LOC106562357 | coding | upstream | 131418 | 74363115 ~ 74378029 (+) |
| LOC110526572 | LOC106562350 | coding | downstream | 509 | 74536945 ~ 74580991 (+) |
| LOC110515568 | LOC106587555 | coding | downstream | 65078 | 74601514 ~ 74607809 (+) |
| LOC110526573 | LOC106594537 | coding | downstream | 72955 | 74609391 ~ 74612035 (+) |
| LOC110526575 | LOC106587557 | coding | downstream | 94583 | 74631019 ~ 74656748 (+) |
| LOC110526576 | tm2d3 | coding | downstream | 120452 | 74656888 ~ 74663789 (+) |
| G544739 | NA | non-coding | upstream | 10351 | 74496090 ~ 74499096 (+) |
| G544766 | NA | non-coding | upstream | 16864 | 74492278 ~ 74492583 (+) |
| G544761 | NA | non-coding | upstream | 29035 | 74480158 ~ 74480412 (+) |
| G544758 | NA | non-coding | upstream | 38989 | 74469982 ~ 74470458 (+) |
| G544757 | NA | non-coding | upstream | 40639 | 74468264 ~ 74468808 (+) |
| G544817 | NA | non-coding | downstream | 58358 | 74594794 ~ 74595064 (+) |
| G544828 | NA | non-coding | downstream | 75655 | 74612091 ~ 74612578 (+) |
| G544829 | NA | non-coding | downstream | 78098 | 74614534 ~ 74614920 (+) |
| G544830 | NA | non-coding | downstream | 78695 | 74615131 ~ 74615703 (+) |
| G544831 | NA | non-coding | downstream | 79386 | 74615822 ~ 74616032 (+) |
| G544565 | NA | other | upstream | 221309 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 1121760 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | other | upstream | 1364100 | 73037953 ~ 73182742 (+) |
| G542890 | NA | other | upstream | 1742596 | 72765681 ~ 72766851 (+) |
| saa | saa | other | upstream | 1842575 | 72665460 ~ 72666872 (+) |
| G545485 | NA | other | downstream | 701364 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 885425 | 75421861 ~ 75422752 (+) |
| G546464 | LOC106562315 | other | downstream | 1391792 | 75928228 ~ 75970674 (+) |
| LOC110526968 | fto | other | downstream | 2350996 | 76827001 ~ 77038395 (+) |
| G547884 | NA | other | downstream | 2741556 | 77277992 ~ 77279354 (+) |
