LOC110526592 (LOC106587573)


Basic Information

Item Value
gene id LOC110526592
gene name LOC106587573
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 75454987 ~ 75456513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607689.2
GCTTTCCAGTACATGAGCAAAGTCTAGggtgctctgtttttttgtcatGCAAGAGCCATTCTTATCTCTTTTAATGCTCAACTGCTTTGCCCTACTTGCCCCGAAGAACTCTGAACAGCAAGCAATACTTTGAGAAGCTACTTTTTCACTGCCTTTGAAAGACAAAATGAATCTGGAAGAGTACTTCAAGAGGATCGGGTTCAACGGCCCATTTTCTAAACCAGACCTTGAAACACTGAACCAAGTCCACAAACACCATGTGATGTCAATACCATTTGAAAACCTCAGCATTCACTGTGGTGAGAAGATCACTATGGACCATGAGTTGATTTTCAATAAGATTGTGAGGAGCAATCGGGGGGGTTGGTGTTGTGAGAATAACCTCCTCTTTGCTTGGGTACTAAAAGAGATGGGTTATAATCCAGTAACACTGGGTTCAAGAGTCTACAACAACACCATAAACCAGTTCGGGCCAACAGACTCTCACCTCATCAACAAGGTGGTCATTGATGGGACTGCTTACATTGCAGACGTGAGCTTTGGGGTATCCTCCCAAATATGGCACCCTCTTGAGCTCGTCTCCGGGAAGGACCAGCCACAATCCCCTGGTGTCTTCCGTCTCATACAAGATGGAGACCTGTGGACCTTGGAGAAGACTGGTCGAAAGCCTCTCGTTCTCAATGAGGCCTTTGCCAACTCACCTCTGGTAGACAAGAGCCCAACCAAGAAGATCTACGGCTTCACCCTGGTTCCCCGTGGGTTTGATCATTTCCTAGAGACTTCCCACTGCCTTCAGACAGATCCAAAGTCTCTATTCACCAACAAGTCCATCTGCTCACTGCAGACGGCTACAGGATTCAGAGCTCTAATTGGCTGGACCTTCAGTGAGGTCACCTACAACAACCAGGATGGTTTTGATGTTTTGGATATGAAAGACATATCTGATGATGATGTGGATAAAGTGCTGAAGGAAATGTTTAATGTGTTGTTGGCAAACAAGTTGGTTCCCATAAACAACAAAGCTGGCTACACTATTTAAGAACTTGATTGCCTGTAACATGTAATATTTAATGTGGTGTAATTGTAATGTAGCCTTGGCAAATCTAGGTTCTGCTACATTGACCAAAGATTCCTCACAACGAGATCAGTGAGATATACAAAACACATTTCGTATTTTCTCTCAATATAAAAAATTAATTTCACCAGAGCTGATTGTGCGGTCTTTGAATACTcaataaacattattttaaacaaa

Function

NR:

description
arylamine N-acetyltransferase, pineal gland isozyme NAT-10-like

GO: NA

KEGG:

id description
K00622 nat; arylamine N-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607689.2 True 1255 mRNA 0.43 2 75454987 75456513

Neighbor

gene id symbol gene type direction distance location
LOC110526588 LOC106562377 coding upstream 46312 75393797 ~ 75408675 (+)
LOC110526584 LOC106587566 coding upstream 130351 75316505 ~ 75324636 (+)
LOC110526583 LOC106562374 coding upstream 260297 75168568 ~ 75194690 (+)
LOC110526582 LOC106562373 coding upstream 299459 74922396 ~ 75155528 (+)
LOC118965044 LOC106609580 coding upstream 551304 74902940 ~ 74903683 (+)
LOC110526593 cnep1r1 coding downstream 89 75456602 ~ 75459378 (+)
heatr3 LOC106587571 coding downstream 3146 75459659 ~ 75468641 (+)
tent4b LOC106587575 coding downstream 17530 75474043 ~ 75498286 (+)
LOC110526596 LOC106587576 coding downstream 42183 75498696 ~ 75572903 (+)
LOC110526967 LOC106587577 coding downstream 207856 75664369 ~ 75702602 (+)
G545618 NA non-coding upstream 10635 75443690 ~ 75444352 (+)
G545492 NA non-coding upstream 117969 75335010 ~ 75337018 (+)
G545506 NA non-coding upstream 197759 75257002 ~ 75257228 (+)
G545504 NA non-coding upstream 199407 75255374 ~ 75255580 (+)
G545494 NA non-coding upstream 208744 75245816 ~ 75246243 (+)
G545684 NA non-coding downstream 140652 75597165 ~ 75597427 (+)
G545725 NA non-coding downstream 201782 75658295 ~ 75658516 (+)
G545742 NA non-coding downstream 230234 75686747 ~ 75689195 (+)
G545716 NA non-coding downstream 246977 75703490 ~ 75728642 (+)
G545601 NA other upstream 32235 75421861 ~ 75422752 (+)
G545485 NA other upstream 216823 75237800 ~ 75238164 (+)
G544565 NA other upstream 1166849 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 2067300 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 2309640 73037953 ~ 73182742 (+)
G546464 LOC106562315 other downstream 471715 75928228 ~ 75970674 (+)
LOC110526968 fto other downstream 1430919 76827001 ~ 77038395 (+)
G547884 NA other downstream 1821479 77277992 ~ 77279354 (+)
G548000 NA other downstream 2056096 77512609 ~ 77523423 (+)
LOC110526614 mmp2 other downstream 2357862 77814375 ~ 77847797 (+)

Expression


Co-expression Network