heatr3 (LOC106587571)


Basic Information

Item Value
gene id heatr3
gene name LOC106587571
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 75459659 ~ 75468641 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607688.2
CATAAATACGACACCCCTTATGCATTGCGAGAGTAAGGACCATTTTACGGCACCCCGACGAATCTCCACCGATGTTCCACATGGCTTAAAATGATGCGAAACGTGAGAGTGTGACAGCCTACTACATGATAGATTAAGTGAGAAACGATATTGATCGAAATAAACTATGGGTAAAAGTAAGACTAACAAATTTAGACGTCCACAGTTCAACGCAGAGGGACTGTCTGTAACTGCTGTAAAGGAAGTGGAAGAGGACCACGATGAAGTCTGTGATGGAGTCGACTCTCCAGCTGGGGAGTTACTGGAgaaaTTGCAGAGTCCCAGTGCAGATGTGCGTGAGTTTGCTTGTGCCAGCATATCACGCCTCGTGCAGCAGAGCCAGACCATCCCAGGCTTCCTCCAGCGGGATGCGGTGAGACGTCTCGGGCCCTTACTGCTGGACCGCAGCCTGGCCGTCAGGGAGACTGCCACAGGGGCACTCAGGAACCTGAGTGCCTGTGGGGGTCATGAGGTGTGTGAGGACATGGTGAAACAGGACGTCATGACTCCTCTGACTGCTCTGCTTCGAGAGTGCTGTGCTGTGTTTGAGACCAATGATGCCCTCTCGTTAAAAGGGCAGAAAAACACAGTGGAAGATGTAGCCAATGAAGCAGTTAACTTGCTGTGGAATCTCTGTGAGAGCAGTAGCCAGGCACTCTCTGTGTTCAACAAAGCAGGCATTCTGGATGTTATCCTACAGTGTCTGGAGCGACACACTCACAACATCAAGCTGGCTTTGTCTGCAGCCCACTGTTTGCACACAGTGACTGAGGACAACGCAGAGTTGCTGTGTAGTATGAACAATGCTGTATTGGGGACTCTAGAGAGTGTGCTGCTATCCTCACAGGCGGACATGGCTCACACACTGCTCAGAACACTGGCTGCAGGGTCAGTGTGGAACCTGAAGAGCAGCCTGCCCACGGCCCGCCAGGCCCAGACCCTCAACGCCCTGATGGCCACCCTGTCCCAGTGCTTGGAGCTGGATGCTGGCACGCTGATACCCCAGCTCCGCCAGGCTGAGGTGGCCCGCAGTGCCACTGCCTCAGAGGCAGGGAACATGGAGGACCACCAGGCAGCTGCAGGGAATATGGctgtagaggagatggaggagggggttgGACCGAGGACAAATGGAAAGGCAAACAAGATAGATAAAGACTTCTCTGACCTCCTGCCTAGGGGCAAGGAGGAGCTGAGGGAGGCGACGGCCTTGCTGACAGCCCAGCAGACGTCCTTGGAGATCATCGTCAACATGTGCTGCTCTGATGACCCGTCAGACGATGAGTGGGAGGAGGCGTCGAGCAGCGACGAGAGTGAGATGTGTCCTGACGGCCTCTCTGAAGGGAACACCAGCCTCCTGTCCCCACTGTGTCTGTCTGCTGAGGTCCACGCGGCTCTGATCAACCACAACATCCCAGAGAAGGTTCTCAAGAAGACCCAGTTCCCCAGCAGCGAGGCGATGGACGTATGTCGTCATAATCCCACCTGGAAAATGTTGATGAAAAAGATGCATCGGGTGCAGTACAGGGCCCTGACGTGCCTTCACAACATGCTGTCTACTATGGACGCTGAGTCCCTAGGGGGAGCAGCCGCTCTTCAGGCTGTCGCACAACACCTGTCCACGCTGGTCTTCAGTCCTCCAGAGATCCCTAAGGAGGAGGAATTCCTTGAGGCAGTTACCAGTGCCATGCGATCCCTCTTACAGATCATAGCCTATATGAAAATCCCACAGtgTATGACACCCCAGCAGCTGATGAGCCTGAGCGAGGCGGCGACCTGCTGTGACGTGGTCAGTGTGAGAGTGAACGCTCTGGCCATCCTAGGCATCACAGGAAGCACACTGGCTAAAGAGAAGAGGACAGCTGAAACTCTGCAGATGATTGGCAATGCCTTACTCCAAGTTGCTACAAAGGATGCCGACCTTGTGGTTTGTGGAGAGGCCCTGGATGCTCTGTTTGATGTTTTTGCGGATGGAGACGAGGCAGAGAGAGCAGCTAAAAACATCAACTTACTGGCGGCTCTGAAGGCACTTCAACCTGTCTTCAAGGCTAAGATTCGTAAAGAGGGGAAGGGAAAGTACAGCCCTGAGCAGCTGTGTGTGCTGGACAACATCAAAGTCAACCTAAGAAGGTTTATTGGCTACCTGGAGACTGTGGTAAAAAAATGACAGCGGCCTGACTACGACAccatctgactgactggctgacataAGATGAAATGACTCATAATTTACAATACAATGGACCCAGAGTTGCCCATAGAGCCTTTGGACAGAACAGAGGGAATGGGGTTGAGGGGAATTCCCTAATAGACCCTCATTAAAGGGACagttcattccaaaatcattgttTTTGAGTGAACTATTCCTTTAACATCTATATAACTGATTTTGATGTTGGGTATCTTTTTGTTTTAATGTTCTGACTGAAATGCTTAACTATTTTCCTTGGTAGGTGAGTGTTTACATAATTATTTGTCCAAATTTTTTTTTAACGTGCGTTATTTTGAATTACTGTTGCAGTACATAGTGACGCATTGTTTTACTTTATGTATAAAAGTACATTTCAATGTGCTGTATTTTAAAGGTATTGACAGAACATTGTATGGTTTATTTTACACATCTTTATCAACCAACTCTCACGTCACACACTCATAGTGTAGCCCTCCGTGTTAGGAATGACCAGTTGTAGTATTCATGTGCTTCTCACCCAAGAATCCGCTATCTGACCCCATTTAATGactctgtcatgttgtgctgtCATGGAAAATGAGATGGACAGGCCTAGTGTTTCCTGACCTTTGGGTTGCTATGGCTCTACTGCCTGCAGGCATTTACCATTGTATGACAAGGCCATCTGTTTACCCCCCAGTGTCTACTGACCATGTGAGATGTCATGAATAAAGCAGAACACACCATCCA

Function

NR:

description
HEAT repeat-containing protein 3-like

GO: NA

KEGG:

id description
K24812 HEATR3; HEAT repeat-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607688.2 True 2959 mRNA 0.50 15 75459659 75468641

Neighbor

gene id symbol gene type direction distance location
LOC110526593 cnep1r1 coding upstream 281 75456602 ~ 75459378 (+)
LOC110526592 LOC106587573 coding upstream 3146 75454987 ~ 75456513 (+)
LOC110526588 LOC106562377 coding upstream 50984 75393797 ~ 75408675 (+)
LOC110526584 LOC106587566 coding upstream 135023 75316505 ~ 75324636 (+)
LOC110526583 LOC106562374 coding upstream 264969 75168568 ~ 75194690 (+)
tent4b LOC106587575 coding downstream 5402 75474043 ~ 75498286 (+)
LOC110526596 LOC106587576 coding downstream 30055 75498696 ~ 75572903 (+)
LOC110526967 LOC106587577 coding downstream 195728 75664369 ~ 75702602 (+)
nod2 nod2 coding downstream 284296 75752937 ~ 75765291 (+)
cylda LOC100380700 coding downstream 310775 75779416 ~ 75815231 (+)
G545618 NA non-coding upstream 15307 75443690 ~ 75444352 (+)
G545492 NA non-coding upstream 122641 75335010 ~ 75337018 (+)
G545506 NA non-coding upstream 202431 75257002 ~ 75257228 (+)
G545504 NA non-coding upstream 204079 75255374 ~ 75255580 (+)
G545494 NA non-coding upstream 213416 75245816 ~ 75246243 (+)
G545684 NA non-coding downstream 128524 75597165 ~ 75597427 (+)
G545725 NA non-coding downstream 189654 75658295 ~ 75658516 (+)
G545742 NA non-coding downstream 218106 75686747 ~ 75689195 (+)
G545716 NA non-coding downstream 234849 75703490 ~ 75728642 (+)
G545601 NA other upstream 36907 75421861 ~ 75422752 (+)
G545485 NA other upstream 221495 75237800 ~ 75238164 (+)
G544565 NA other upstream 1171521 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 2071972 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 2314312 73037953 ~ 73182742 (+)
G546464 LOC106562315 other downstream 459587 75928228 ~ 75970674 (+)
LOC110526968 fto other downstream 1418791 76827001 ~ 77038395 (+)
G547884 NA other downstream 1809351 77277992 ~ 77279354 (+)
G548000 NA other downstream 2043968 77512609 ~ 77523423 (+)
LOC110526614 mmp2 other downstream 2345734 77814375 ~ 77847797 (+)

Expression


Co-expression Network