LOC118965105


Basic Information

Item Value
gene id LOC118965105
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 77963249 ~ 77963303 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052438.1
GACAAtttgctcttttagtatttctccagtaggtttcctcaaggagaaagccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052438.1 True 55 mRNA 0.44 1 77963249 77963303

Neighbor

gene id symbol gene type direction distance location
LOC110526615 pcat2 coding upstream 96933 77848962 ~ 77866316 (+)
LOC110526614 mmp2 coding upstream 115452 77814375 ~ 77847797 (+)
LOC110526613 LOC106587615 coding upstream 232760 77723825 ~ 77730489 (+)
irx5a irx5 coding upstream 463816 77495753 ~ 77499433 (+)
LOC110526968 fto coding upstream 924854 76827001 ~ 77038395 (+)
LOC110526617 LOC106562414 coding downstream 4864 77968167 ~ 78042147 (+)
LOC110525051 LOC106587608 coding downstream 123913 78087216 ~ 78088746 (+)
LOC110526620 lt4r1 coding downstream 125604 78088907 ~ 78090301 (+)
LOC110526621 LOC106587617 coding downstream 140592 78103895 ~ 78127426 (+)
LOC110526623 LOC106587623 coding downstream 257231 78220534 ~ 78224155 (+)
G548498 NA non-coding upstream 27698 77934078 ~ 77935551 (+)
G548472 NA non-coding upstream 105522 77856801 ~ 77857727 (+)
G548467 NA non-coding upstream 131573 77830897 ~ 77831676 (+)
G548466 NA non-coding upstream 135365 77827226 ~ 77827884 (+)
G548570 NA non-coding downstream 153788 78117091 ~ 78117850 (+)
G548573 NA non-coding downstream 164890 78128193 ~ 78188167 (+)
G548642 NA non-coding downstream 284433 78247736 ~ 78248253 (+)
G548629 NA non-coding downstream 388705 78352008 ~ 78409500 (+)
G548000 NA other upstream 439826 77512609 ~ 77523423 (+)
G547884 NA other upstream 683895 77277992 ~ 77279354 (+)
G548703 NA other downstream 457557 78420860 ~ 78496470 (+)
G549342 NA other downstream 805953 78769256 ~ 78769907 (+)
G549345 NA other downstream 808809 78772112 ~ 78772557 (+)
LOC110526645 unc13c other downstream 1188061 79089592 ~ 79354959 (+)
G550054 NA other downstream 1516178 79479481 ~ 79480078 (+)

Expression


Co-expression Network