LOC110526620 (lt4r1)


Basic Information

Item Value
gene id LOC110526620
gene name lt4r1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 78088907 ~ 78090301 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607739.2
CTCTCACAGAGTGATGGCTCTGTGAAAAACCAACCTCTTTCCTGTTCTCCTCAGCAAAGTTAAAGGGAAGTGAAAGCTTGCTGGTGCAGCACTTTTTTTCTGTCTGAGTATGTACACCAGATAGAAGGCACGTAAAGCGAGGTGAGGCAAGGCGATCGGCAGCATCAACCAGAACCGTTCGATCATCAGCTGTCTTCAGCTTCAGAGTCCACCATGGCTCCTGATGAGTTTCCTGGCGGGACAGTGGTGGCCTGTGTGATCCTGGGCCTGTCGTTCCTGGTGGGGGTCCCAGGGAACCTGCTGGTGATCTGGACCATCCTGAGGCACGTCCAGCAGCGCTCCCACACCGTGGTGCTCATCCTCCACCTGGCTGCTGCAGACCTGCTGGTGCTCATCACCCTGCCCCTGTGGATCTACTCCCTGGCCCGCTCCTGGGTGTTCGGGGAGGCATCCTGTAAGGCCATGGTGTACGTCATCAACACCTGCATGTACAGCAGCGTCTTCCTCATCACCCTCATGAGCGTTGAGCGCTTTGTCGCTGTCCGACACCCCTTTGCCTCAGCCGGCTGGAGGAGGAAGAAGGCCTTGAATAAAGTTCTTCTTGTTCTGTGGGCTGCTGCGTTCCTATTCAGCACCCCGGTCTTTCCCACCCAGGTGGTGGAGGGGGACCCTGGGGAGGAGCATTGCCTGTACAGGGACTACACCTCAGACGGCCAGGAGGCAGTGTGTGTTCTACTGGAGACGCTGGTGGGCTTTGCTGTCCCCTTTTGCATTCTTGTGGTCTGCTACAGCTGTCTCTACAGCCGCATCGCACAGATGACCTTTAAGTCCAAGCGTAAGTCCATGGGGTTGATTGCAAGCATGGTAGTGGTGTTCGCATTATGCTGGACCCCTCACCACGTCGGCAACGTGCTCTCCctcgtcatcctcaccatcaAGGGGTCCCACCGAGAGGCCGCAGCGCGTATAGAGAGCGTCAGAACCACCATGACTTTCATTGCTGGAGCGCTCGTGTTCATCAGTAGTTCGGTCAACCCTTTGCTCTATGTGTTTGTGGCACGTACGTTCCGGAGTTCTCTGAGGGAGACAGGCATTCAGAAATTGTTCTGGCACATCTCAAGCACAGCTCCTGGAGAGGGGACTAAAGAACTGTTCTTTGTGACCAAGAGACCAAGCATCTCTCAGACCCAGAGCCACAGCTCCCAGTGTGTCACAGAGCCTAAGGAACAAATGGATGTACTTATAAATGTATGTGAAAATGTTTCTTCCTGAGATTGAAAATGATGTTTATCACATGTTTTTGATAAAGAGTTTTGTGTGTAAATTACAAAGTTTGATTTGTCACATTGTTTCTATATGTTAATTAACTTAAAATGTAGAATAGCAATTGTTAGT

Function

NR:

description
leukotriene B4 receptor 1-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607739.2 True 1395 mRNA 0.52 1 78088907 78090301

Neighbor

gene id symbol gene type direction distance location
LOC110525051 LOC106587608 coding upstream 161 78087216 ~ 78088746 (+)
LOC110526617 LOC106562414 coding upstream 46760 77968167 ~ 78042147 (+)
LOC118965105 NA coding upstream 125604 77963249 ~ 77963303 (+)
LOC110526615 pcat2 coding upstream 222591 77848962 ~ 77866316 (+)
LOC110526614 mmp2 coding upstream 241110 77814375 ~ 77847797 (+)
LOC110526621 LOC106587617 coding downstream 13594 78103895 ~ 78127426 (+)
LOC110526623 LOC106587623 coding downstream 130233 78220534 ~ 78224155 (+)
LOC110526624 LOC105022628 coding downstream 136062 78226363 ~ 78358769 (+)
LOC110526630 LOC106562411 coding downstream 276432 78366733 ~ 78379992 (+)
LOC110526629 LOC106562410 coding downstream 291083 78381384 ~ 78389020 (+)
G548498 NA non-coding upstream 153356 77934078 ~ 77935551 (+)
G548472 NA non-coding upstream 231180 77856801 ~ 77857727 (+)
G548467 NA non-coding upstream 257231 77830897 ~ 77831676 (+)
G548466 NA non-coding upstream 261023 77827226 ~ 77827884 (+)
G548570 NA non-coding downstream 26790 78117091 ~ 78117850 (+)
G548573 NA non-coding downstream 37892 78128193 ~ 78188167 (+)
G548642 NA non-coding downstream 157435 78247736 ~ 78248253 (+)
G548629 NA non-coding downstream 261707 78352008 ~ 78409500 (+)
G548000 NA other upstream 565484 77512609 ~ 77523423 (+)
G547884 NA other upstream 809553 77277992 ~ 77279354 (+)
LOC110526968 fto other upstream 1052594 76827001 ~ 77038395 (+)
G548703 NA other downstream 330559 78420860 ~ 78496470 (+)
G549342 NA other downstream 678955 78769256 ~ 78769907 (+)
G549345 NA other downstream 681811 78772112 ~ 78772557 (+)
LOC110526645 unc13c other downstream 1061063 79089592 ~ 79354959 (+)
G550054 NA other downstream 1389180 79479481 ~ 79480078 (+)

Expression


Co-expression Network