LOC110526647 (LOC106562494)


Basic Information

Item Value
gene id LOC110526647
gene name LOC106562494
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 79672029 ~ 79699222 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981061.1
CAAAGCCCTTGGTAAGTAGCTTAGtgttccctctctgtccctgcccTCCAATCCTCTAACTAACGTTGGAAAACACTCCTCAGGATAGCATACCGTCTGACAGACAAACCAACTTCCCTCATTAGGTCTGTGGTTAATCAGCTGCAGCCATGTGTGACCAGACGTTTTTGGCCATCACTTTCGGGCCGTGTGACAGCTGCTCAGAGAACCGCCCCTTGATGAATCTATACATCAAGACTGAACCCATCAACTACTGCTCACTATGCATGGAGATTATGGCGTGCCAGGGCCTTGCGAGCGGCGAGACTCTGAAGTCGCTGAAGGCCGAGAGCGAGACGCTGAGGAAGAAGCTCGAGGAGGAGCGGAAGAAGCTGCACGATGTGGAGTtggagaAGGTAGCTGAGAAGGCGGAAGCTCTTGGTGAGTTAAACATGAAGACTCGGAGGACACTGAAGGGCCATGGCAACAAGGTGCTCTGTATGGACTGGTGCAAAGACAAACGACGCATTGTCAGCTCCTCACAGGATGGGAAGGTCATCGTATGGGATGCTTTCACCACCAATAAGGAACATGCAGTGACCATGCCGACTACGTGGGTGATGGCGTGTGCCTACGCCCCCTCTGGCTGTGCCATCGCCTGTGGGGGATTGGATAATAAGTGCTCAGTGTACCCTCTCTCATTGGACAAGGACGAGAACTTGGCGGCCAAGAAGAAGTCGGTTGCCATGCACACCAACTACCTGTCCGGCTGCACCTTCACCAACTCTGACATGCAAatcttGACATCCAGTGGGGACGGTACCAGTGCGCTGTGGGACGTGGAGAGTGGTCAGCTGCTGCAGAGTTTCCACGGTCACTCTGCTGATGTCCTCACTCTGGACCTCGCCCCCTCTGAGACTGGAAACACCTTCGTCTCCGggGGTTCTGATAAGAAGGCTAACGTTTGGGACTTGCGCTCAGGGCAGAACGTCCAGTCGTTTGATACCCACGACTCTGACATCAACTGTGTCAAgtactACCCCAGTGGCGATGCTTTTGCCTCTGCTTCTGACGACTCTACCtgcCGTCTGTTTGATCTCAGGGCTGATCGGGAGGTGTCCATCTACTCCAAAGACAGCATAATGTTTGGAGCCGCCAGTGTCGACTTCTCTCTTAGTGgTCGTCTGTTGTTTGCTGGCTATAATGACTACACCATCAATGTGTGGGACGTCCTGAAGGGGACCAGAGTAGCCATCCTGTTTGGTCATGAGAACAGAGTCAGCTCACTCAGAGTCTCTCCTGATGGAACTGCTTTCTGCTCCGGGTCCTGGGACAACACTCTACGGATCTGGGCCTAGAGCTGCTGATGTCATCAGAGCGAGACTGAACCCCTGGAagtcaggggtcagaggttaaggGTCAGGACCAGAGTCATGTGACCAGTCGACCCAGAGTGCCCATGGAGCACACCCTGCCGCAGAAAGAGTCTGCCTATAGAAACTATATTCAGTTACACACAGTAATAAACTATCTAGGTTTGACTCACAGAGACTATTTGTTTGACTGAAGTTGGACTATACCAAATGCTCATCAGGTCAATGAGGTCCTAAAGCTTTATTATGAGCAGTATTacaattattattactattgtatTACTAAAGTCAGTTGAGCAGTTTTCCTCTACAGCAGGTCCTAGCCAATGCCATGCAGTACTGACTTTCCTGTATAGAAGCTAACTCACTGCCGTTTTTATGCTCCCTAGTCCCCCTTTAAACCTGCTTCACAGTCTGTAGTTTACCAGTCAATTAGTCTGCCCAGGTTGTAACTTGCTCAGATCTAAAGCGCAATACTACTGTTATATAAAACCAGGCCATAGACTGTGGCtagccagagagggagaaagagggagtgttTGAAGTATTGTTCATTTGTAATCATAGTCTTCttgtgaaataaatacattttatttaaattattGA
>XM_036981063.1
gatgagtctctctctctctctcactcacactcacactctctaacacacacacacacacatacacaaaatagcaATGCTCCCTTCAGGTGAATCGataacagtgtgtatgtgtgttatttcTCATACCTGAATGTTGACACTGTGTTCCTTTTCTCCTCTATACAGGTCTGTGGTTAATCAGCTGCAGCCATGTGTGACCAGACGTTTTTGGCCATCACTTTCGGGCCGTGTGACAGCTGCTCAGAGAACCGCCCCTTGATGAATCTATACATCAAGACTGAACCCATCAACTACTGCTCACTATGCATGGAGATTATGGCGTGCCAGGGCCTTGCGAGCGGCGAGACTCTGAAGTCGCTGAAGGCCGAGAGCGAGACGCTGAGGAAGAAGCTCGAGGAGGAGCGGAAGAAGCTGCACGATGTGGAGTtggagaAGGTAGCTGAGAAGGCGGAAGCTCTTGGTGAGTTAAACATGAAGACTCGGAGGACACTGAAGGGCCATGGCAACAAGGTGCTCTGTATGGACTGGTGCAAAGACAAACGACGCATTGTCAGCTCCTCACAGGATGGGAAGGTCATCGTATGGGATGCTTTCACCACCAATAAGGAACATGCAGTGACCATGCCGACTACGTGGGTGATGGCGTGTGCCTACGCCCCCTCTGGCTGTGCCATCGCCTGTGGGGGATTGGATAATAAGTGCTCAGTGTACCCTCTCTCATTGGACAAGGACGAGAACTTGGCGGCCAAGAAGAAGTCGGTTGCCATGCACACCAACTACCTGTCCGGCTGCACCTTCACCAACTCTGACATGCAAatcttGACATCCAGTGGGGACGGTACCAGTGCGCTGTGGGACGTGGAGAGTGGTCAGCTGCTGCAGAGTTTCCACGGTCACTCTGCTGATGTCCTCACTCTGGACCTCGCCCCCTCTGAGACTGGAAACACCTTCGTCTCCGggGGTTCTGATAAGAAGGCTAACGTTTGGGACTTGCGCTCAGGGCAGAACGTCCAGTCGTTTGATACCCACGACTCTGACATCAACTGTGTCAAgtactACCCCAGTGGCGATGCTTTTGCCTCTGCTTCTGACGACTCTACCtgcCGTCTGTTTGATCTCAGGGCTGATCGGGAGGTGTCCATCTACTCCAAAGACAGCATAATGTTTGGAGCCGCCAGTGTCGACTTCTCTCTTAGTGgTCGTCTGTTGTTTGCTGGCTATAATGACTACACCATCAATGTGTGGGACGTCCTGAAGGGGACCAGAGTAGCCATCCTGTTTGGTCATGAGAACAGAGTCAGCTCACTCAGAGTCTCTCCTGATGGAACTGCTTTCTGCTCCGGGTCCTGGGACAACACTCTACGGATCTGGGCCTAGAGCTGCTGATGTCATCAGAGCGAGACTGAACCCCTGGAagtcaggggtcagaggttaaggGTCAGGACCAGAGTCATGTGACCAGTCGACCCAGAGTGCCCATGGAGCACACCCTGCCGCAGAAAGAGTCTGCCTATAGAAACTATATTCAGTTACACACAGTAATAAACTATCTAGGTTTGACTCACAGAGACTATTTGTTTGACTGAAGTTGGACTATACCAAATGCTCATCAGGTCAATGAGGTCCTAAAGCTTTATTATGAGCAGTATTacaattattattactattgtatTACTAAAGTCAGTTGAGCAGTTTTCCTCTACAGCAGGTCCTAGCCAATGCCATGCAGTACTGACTTTCCTGTATAGAAGCTAACTCACTGCCGTTTTTATGCTCCCTAGTCCCCCTTTAAACCTGCTTCACAGTCTGTAGTTTACCAGTCAATTAGTCTGCCCAGGTTGTAACTTGCTCAGATCTAAAGCGCAATACTACTGTTATATAAAACCAGGCCATAGACTGTGGCtagccagagagggagaaagagggagtgttTGAAGTATTGTTCATTTGTAATCATAGTCTTCttgtgaaataaatacattttatttaaattattGA
>XM_036981064.1
tctgactcTAACCAATCTAACGGCTCCTTCCTGGACCAATACAATCCTTTAAGATCTTCACAAATTCCCAGGGAATAGGgatagatttgagattctttatgTATTTTTAGGGGGTTGGAGAGGACCCCATCTGAGAATGCAGCCTCCCTATCTGTCTGATATACAGTAGCAGCGAGCCTCtttcaacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccattcctgGATGAATTCACCACCTCATTTTATCTGTACTCCCTTCTCTCTGGCAGCTCATCCACACTTACAGCTACCTTGTCTTTCACTTCTCTAAACAACAATAGGTGCAAAAACACCTTTCAAAGGAAAATAACATACATTTAAACAAGGAAACTGCAATGTGGTAAAATAAAATATggaaaatgtgatttttctgtcAAGTATTTACATGAACATTATTAGAGGAAAGTTAGGCTATATTTAGTACAATTACTACCAAAGACAGTCATAGTGGCTTCTCTGGAGCGAGAAAAACAGagatatagaaagagagggagaggtagagacttgccagagagcgagtgagacaagagacagggaaagagggagagagagcgggggagaaggAGCACATCAGCGCGGCAGCAGCATCAGGGGCATATTCATTAGTCCAAACAAAAACTAGAGTTCATATTGGAAAAATGCAGATGGCGTGCCAGGGCCTTGCGAGCGGCGAGACTCTGAAGTCGCTGAAGGCCGAGAGCGAGACGCTGAGGAAGAAGCTCGAGGAGGAGCGGAAGAAGCTGCACGATGTGGAGTtggagaAGGTAGCTGAGAAGGCGGAAGCTCTTGGTGAGTTAAACATGAAGACTCGGAGGACACTGAAGGGCCATGGCAACAAGGTGCTCTGTATGGACTGGTGCAAAGACAAACGACGCATTGTCAGCTCCTCACAGGATGGGAAGGTCATCGTATGGGATGCTTTCACCACCAATAAGGAACATGCAGTGACCATGCCGACTACGTGGGTGATGGCGTGTGCCTACGCCCCCTCTGGCTGTGCCATCGCCTGTGGGGGATTGGATAATAAGTGCTCAGTGTACCCTCTCTCATTGGACAAGGACGAGAACTTGGCGGCCAAGAAGAAGTCGGTTGCCATGCACACCAACTACCTGTCCGGCTGCACCTTCACCAACTCTGACATGCAAatcttGACATCCAGTGGGGACGGTACCAGTGCGCTGTGGGACGTGGAGAGTGGTCAGCTGCTGCAGAGTTTCCACGGTCACTCTGCTGATGTCCTCACTCTGGACCTCGCCCCCTCTGAGACTGGAAACACCTTCGTCTCCGggGGTTCTGATAAGAAGGCTAACGTTTGGGACTTGCGCTCAGGGCAGAACGTCCAGTCGTTTGATACCCACGACTCTGACATCAACTGTGTCAAgtactACCCCAGTGGCGATGCTTTTGCCTCTGCTTCTGACGACTCTACCtgcCGTCTGTTTGATCTCAGGGCTGATCGGGAGGTGTCCATCTACTCCAAAGACAGCATAATGTTTGGAGCCGCCAGTGTCGACTTCTCTCTTAGTGgTCGTCTGTTGTTTGCTGGCTATAATGACTACACCATCAATGTGTGGGACGTCCTGAAGGGGACCAGAGTAGCCATCCTGTTTGGTCATGAGAACAGAGTCAGCTCACTCAGAGTCTCTCCTGATGGAACTGCTTTCTGCTCCGGGTCCTGGGACAACACTCTACGGATCTGGGCCTAGAGCTGCTGATGTCATCAGAGCGAGACTGAACCCCTGGAagtcaggggtcagaggttaaggGTCAGGACCAGAGTCATGTGACCAGTCGACCCAGAGTGCCCATGGAGCACACCCTGCCGCAGAAAGAGTCTGCCTATAGAAACTATATTCAGTTACACACAGTAATAAACTATCTAGGTTTGACTCACAGAGACTATTTGTTTGACTGAAGTTGGACTATACCAAATGCTCATCAGGTCAATGAGGTCCTAAAGCTTTATTATGAGCAGTATTacaattattattactattgtatTACTAAAGTCAGTTGAGCAGTTTTCCTCTACAGCAGGTCCTAGCCAATGCCATGCAGTACTGACTTTCCTGTATAGAAGCTAACTCACTGCCGTTTTTATGCTCCCTAGTCCCCCTTTAAACCTGCTTCACAGTCTGTAGTTTACCAGTCAATTAGTCTGCCCAGGTTGTAACTTGCTCAGATCTAAAGCGCAATACTACTGTTATATAAAACCAGGCCATAGACTGTGGCtagccagagagggagaaagagggagtgttTGAAGTATTGTTCATTTGTAATCATAGTCTTCttgtgaaataaatacattttatttaaattattGA

Function

NR:

description
guanine nucleotide-binding protein subunit beta-5b-like

GO: NA

KEGG:

id description
K04539 GNB5; guanine nucleotide-binding protein subunit beta-5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981061.1 False 1958 mRNA 0.50 13 79672029 79699222
XM_036981063.1 False 1998 mRNA 0.49 12 79681311 79699222
XM_036981064.1 True 2409 mRNA 0.48 12 79681655 79699222
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110511859 myo5a coding upstream 498 79578522 ~ 79671531 (+)
LOC118936661 LOC106592882 coding upstream 94039 79571838 ~ 79577990 (+)
LOC110506774 LOC106587663 coding upstream 101091 79543079 ~ 79570938 (+)
LOC110506775 LOC106562487 coding upstream 140524 79524809 ~ 79531505 (+)
LOC110526645 unc13c coding upstream 317070 79089592 ~ 79354959 (+)
LOC110526648 LOC106587674 coding downstream 139 79699361 ~ 79705604 (+)
nrk2 LOC106562430 coding downstream 158214 79857436 ~ 79860739 (+)
LOC110514990 LOC106587684 coding downstream 188292 79887514 ~ 79898351 (+)
LOC110506133 LOC106562504 coding downstream 220741 79919963 ~ 79942131 (+)
LOC118965045 LOC106562464 coding downstream 255577 79954799 ~ 80064775 (+)
G550089 NA non-coding upstream 15834 79655812 ~ 79656195 (+)
G550142 NA non-coding upstream 23875 79647835 ~ 79648154 (+)
G550138 NA non-coding upstream 41402 79630388 ~ 79630627 (+)
G550104 NA non-coding upstream 133030 79538494 ~ 79538999 (+)
G550155 NA non-coding downstream 8696 79707918 ~ 79708128 (+)
G550081 NA non-coding downstream 36409 79735631 ~ 79736467 (+)
G550084 trpm7 non-coding downstream 45773 79744995 ~ 79748571 (+)
G550162 NA non-coding downstream 51067 79750289 ~ 79751523 (+)
G550164 LOC100846954 non-coding downstream 62881 79762103 ~ 79762676 (+)
G550054 NA other upstream 191951 79479481 ~ 79480078 (+)
G549345 NA other upstream 899472 78772112 ~ 78772557 (+)
G549342 NA other upstream 902122 78769256 ~ 78769907 (+)
G550265 NA other downstream 369526 80068748 ~ 80069285 (+)
G550305 NA other downstream 500948 80200170 ~ 80200529 (+)
myef2 myef2 other downstream 716225 80415414 ~ 80430972 (+)
G551043 NA other downstream 1221485 80920707 ~ 80921436 (+)
LOC110526107 scg3 other downstream 1754274 81435094 ~ 81466198 (+)

Expression

LOC110526647(LOC106562494) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 50.
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LOC110526647(LOC106562494) Expression in each Bioproject

Bar chart with 21 bars.
LOC110526647(LOC106562494) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 7500.
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Co-expression Network