nrk2 (LOC106562430)


Basic Information

Item Value
gene id nrk2
gene name LOC106562430
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 79857436 ~ 79860739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979143.1
ATATAGCCAATCACCGTTGAACTGGCAGTAAGCGTAGTAGTGAGCCTAGCAGTTAATTTCTCTCTTGGTGGAAGCACACAGCGAAGTGACATCGTCCAACCTTTCACCATATTCTGAAATATGGAAGAATCAAGTAGTTAACATTTACTGAACCTTCTCTTTTGAAGCTTTCTTCCGTCTGATCACTGAGTTCCTAGAGGGCTGACCGGTCCTGGTTTTTTTGACGTTTTTTGCAAGTTTCCTGAACTTTCACTGTCTGACAAGATGAAGTGCATTATCGGCATCGGAGGCGTAACCAACGGGGGAAAGACCACCCTCACCAACAAACTGATCAAGAACCTTCCCAACTGTTGTGTGGTTCATCAGGATGACTTTTTCAAGCCACAAGATCAGATTGAAGTTGGTGAAGATGGCTTTAAGCAGTATGATGGTAAGACGGGTTCTTTCTGGAAGGGTTGGGgggTCATCACTGCCCTCGACATGGACGCCATGATGAGTACCATCTACGCCTGGCTTGACGACCCGGTGAAGTTTGAAAGGTCGCACGGCGTCAACAACACCTTGGATACCGAGATTCTCCCGGAGTCTGACCACAGGGATGAGGGAACTCACATCCTCATCGTGGAAGGATTCCTGCTTTACACCTACGGACCTTTGATCGACGTGCTGAACCAACGCTATTTTATTTCCATTCCATACGAAGTATGCAAAAAGAGGAGGTGCTCAAGAAACTACAAGGTACCAGATCCCCCAGGTCTGTTTGATGGTCACGTCTGGCCCATGTACACCAAACACAAGATCATCATGGAAACATCAGGAGTTGATGTTGTGCAGCTAGATGGAACTAAGTCAAAGGAACATCTGTACAACGCTGTCTATGAAGACGTCCTGAACAACATCCAGAAGTGTCTGTAAGCAACAAAGGTCAGTCTATCGGCTAAGAGAAGGCTATATCTGTGCAGGAGGAGAGGCCTTGCCTTAAACATTTCTACGTCTTTCTGGCCTGCAACTAGCAACACACTTTCTACCAGCGGCTGTTGCCACCGTGTCATTACTCTTTTCTAGTGTAAATTATTCCCTGGCGTTATATGCAGGCATGGTTTTATATCCTCCATATTTATTTCTTTGTTACGAGCCACCAGGCAGTCGGTCACAGAGATGACAGTAGAACAGAGGGTTGCAGCTCAAAGCATAACACCAATAAACAATCCTCCTGCTAAAACa
>XM_036979144.1
AGCCAATCACCGTTGAACTGGCAGTAAGCGTAGTAGTGAGCCTAGCAGTTAATTTCTCTCTTGGTGGAAGCACACAGCGAAGTGACATCGTCCAACCTTTCACCATATTCTGAAATATGGAAGAATCAAGTAGTTAACATTTACTGAACCTTCTCTTTTGAAGCTTTCTTCCGTCTGATCACTGAGTTCCTAGAGGGCTGACCGGTCCTGGTTTTTTTGACGTTTTTTGCAAGTTTCCTGAACTTTCACTGTCTGACAAGATGAAGTGCATTATCGGCATCGGAGGCGTAACCAACGGGGGAAAGACCACCCTCACCAACAAACTGATCAAGAACCTTCCCAACTGTTGTGTGGTTCATCAGGATGACTTTTTCAAGCCACAAGATCAGATTGAAGTTGGTGAAGATGGCTTTAAGCAGTATGATGTCATCACTGCCCTCGACATGGACGCCATGATGAGTACCATCTACGCCTGGCTTGACGACCCGGTGAAGTTTGAAAGGTCGCACGGCGTCAACAACACCTTGGATACCGAGATTCTCCCGGAGTCTGACCACAGGGATGAGGGAACTCACATCCTCATCGTGGAAGGATTCCTGCTTTACACCTACGGACCTTTGATCGACGTGCTGAACCAACGCTATTTTATTTCCATTCCATACGAAGTATGCAAAAAGAGGAGGTGCTCAAGAAACTACAAGGTACCAGATCCCCCAGGTCTGTTTGATGGTCACGTCTGGCCCATGTACACCAAACACAAGATCATCATGGAAACATCAGGAGTTGATGTTGTGCAGCTAGATGGAACTAAGTCAAAGGAACATCTGTACAACGCTGTCTATGAAGACGTCCTGAACAACATCCAGAAGTGTCTGTAAGCAACAAAGGTCAGTCTATCGGCTAAGAGAAGGCTATATCTGTGCAGGAGGAGAGGCCTTGCCTTAAACATTTCTACGTCTTTCTGGCCTGCAACTAGCAACACACTTTCTACCAGCGGCTGTTGCCACCGTGTCATTACTCTTTTCTAGTGTAAATTATTCCCTGGCGTTATATGCAGGCATGGTTTTATATCCTCCATATTTATTTCTTTGTTACGAGCCACCAGGCAGTCGGTCACAGAGATGACAGTAGAACAGAGGGTTGCAGCTCAAAGCATAACACCAATAAACAATCCTCCTGCTAAAACa
>NM_001160654.1
GGCAGTAAGCGTAGTAGTGAGCCTAGCAGTTAATTTCTCTCTTGGTGGAAGCACACAGCGAAGTGACATCGTCCAACCTTTCACCATATTCTGAAATATGGAAGAATCAAGTAGTTAACATTTACTGAACCTTCTCTTTTGAAGCTTTCTTCCGTCTGATCACTGAGTTCCTAGAGGGCTGACCGGTCCTGGTTTTTTTGACGTTTTTTGCAAGTTTCCTGAACTTTCACTGTCTGACAAGATGAAGTGCATTATCGGCATCGGAGGCGTAACCAACGGGGGAAAGACCACCCTCACCAACAAACTGATCAAGAACCTTCCCAACTGTTGTGTGGTTCATCAGGATGACTTTTTCAAGCCACAAGATCAGATTGAAGTTGGTGAAGATGGCTTTAAGCAGTATGATGTCATCACTGCCCTCGACATGGACGCCATGATGAGTACCATCTACGCCTGGCTTGACGACCCGGTGAAGTTTGAAAGGTCGCACGGCGTCAACAACACCTTGGATACCGAGATTCTCCCGGAGTCTGACCACAGGGATGAGGGAACTCACATCCTCATCGTGGAAGGATTCCTGCTTTACACCTACGGACCTTTGATCGACGTGCTGAACCAACGCTATTTTATTTCCATTCCATACGAAGTATGCAAAAAGAGGAGGTGCTCAAGAAACTACAAGGTACCAGATCCCCAGGTCTGTTTGATGGTCACGTCTGGCCCATGTACACCAAACACAAGATCATCATGGAAACATCAGGAGTTGATGTTGTGCAGCTAGATGGAACTAAGTCAAAGGAACATCTGTACAACGCTGTCTATGAAGACGTCCTGAACAACATCCAGAAGTGTCTGTAAGCAACAAAGGTCAGTCTATCGGCTAAGAGAAGGCTATATCTGTGCAGGAGGAGAGGCCTTGCCTTAAACATTTCTACGTCTTTCTGGCCTGCAACTAGCAACACACTTTCTACCAGCGGCTGTTGCCACCGTGTCATTACTCTTTTCTAGTGTAAATTATTCCCTGGCGTTATATGCAGGCATGGTTTTATATCCTCCATATTTATTTCTTTGTTACGAGCCACCAGGCAGTCGGTCACAGAGATGACAGTAGAACAGAGGGTTGCAGCTCAAAGCATAACACCAATAAACAATCCTCCTGC
>XM_036979145.1
CGTAACCAACGGGGGAAAGACCACCCTCACCAACAAACTGATCAAGAACCTTCCCAACTGTTGTGTGGTTCATCAGGATGACTTTTTCAAGTCATCACTGCCCTCGACATGGACGCCATGATGAGTACCATCTACGCCTGGCTTGACGACCCGGTGAAGTTTGAAAGGTCGCACGGCGTCAACAACACCTTGGATACCGAGATTCTCCCGGAGTCTGACCACAGGGATGAGGGAACTCACATCCTCATCGTGGAAGGATTCCTGCTTTACACCTACGGACCTTTGATCGACGTGCTGAACCAACGCTATTTTATTTCCATTCCATACGAAGTATGCAAAAAGAGGAGGTGCTCAAGAAACTACAAGGTACCAGATCCCCCAGGTCTGTTTGATGGTCACGTCTGGCCCATGTACACCAAACACAAGATCATCATGGAAACATCAGGAGTTGATGTTGTGCAGCTAGATGGAACTAAGTCAAAGGAACATCTGTACAACGCTGTCTATGAAGACGTCCTGAACAACATCCAGAAGTGTCTGTAAGCAACAAAGGTCAGTCTATCGGCTAAGAGAAGGCTATATCTGTGCAGGAGGAGAGGCCTTGCCTTAAACATTTCTACGTCTTTCTGGCCTGCAACTAGCAACACACTTTCTACCAGCGGCTGTTGCCACCGTGTCATTACTCTTTTCTAGTGTAAATTATTCCCTGGCGTTATATGCAGGCATGGTTTTATATCCTCCATATTTATTTCTTTGTTACGAGCCACCAGGCAGTCGGTCACAGAGATGACAGTAGAACAGAGGGTTGCAGCTCAAAGCATAACACCAATAAACAATCCTCCTGCTAAAACa

Function

NR:

description
nicotinamide riboside kinase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979143.1 False 1224 mRNA 0.46 8 79857436 79860739
XM_036979144.1 False 1187 mRNA 0.46 8 79857440 79860739
NM_001160654.1 False 1160 mRNA 0.46 9 79857459 79860732
XM_036979145.1 True 852 mRNA 0.47 6 79858242 79860739

Neighbor

gene id symbol gene type direction distance location
LOC110526648 LOC106587674 coding upstream 151832 79699361 ~ 79705604 (+)
LOC110526647 LOC106562494 coding upstream 158214 79672029 ~ 79699222 (+)
LOC110511859 myo5a coding upstream 185905 79578522 ~ 79671531 (+)
LOC118936661 LOC106592882 coding upstream 279446 79571838 ~ 79577990 (+)
LOC110506774 LOC106587663 coding upstream 286498 79543079 ~ 79570938 (+)
LOC110514990 LOC106587684 coding downstream 26775 79887514 ~ 79898351 (+)
LOC110506133 LOC106562504 coding downstream 59224 79919963 ~ 79942131 (+)
LOC118965045 LOC106562464 coding downstream 94060 79954799 ~ 80064775 (+)
LOC110506137 LOC106587708 coding downstream 232734 80093473 ~ 80106535 (+)
LOC110506794 LOC106596910 coding downstream 247816 80108555 ~ 80147068 (+)
G550195 NA non-coding upstream 6071 79851166 ~ 79851365 (+)
G550192 NA non-coding upstream 17252 79839975 ~ 79840184 (+)
G550171 NA non-coding upstream 65364 79791837 ~ 79792072 (+)
G550167 NA non-coding upstream 78899 79778280 ~ 79778537 (+)
G550166 NA non-coding upstream 83764 79768013 ~ 79773672 (+)
G550212 NA non-coding downstream 21115 79881854 ~ 79882692 (+)
G550222 NA non-coding downstream 83981 79944720 ~ 79945040 (+)
G550223 NA non-coding downstream 87022 79947761 ~ 79948588 (+)
G550284 NA non-coding downstream 223696 80084435 ~ 80084712 (+)
G550286 NA non-coding downstream 227099 80087838 ~ 80088156 (+)
G550054 NA other upstream 377358 79479481 ~ 79480078 (+)
LOC110526645 unc13c other upstream 694405 79089592 ~ 79354959 (+)
G549345 NA other upstream 1084879 78772112 ~ 78772557 (+)
G549342 NA other upstream 1087529 78769256 ~ 78769907 (+)
G550265 NA other downstream 208009 80068748 ~ 80069285 (+)
G550305 NA other downstream 339431 80200170 ~ 80200529 (+)
myef2 myef2 other downstream 554708 80415414 ~ 80430972 (+)
G551043 NA other downstream 1059968 80920707 ~ 80921436 (+)
LOC110526107 scg3 other downstream 1592757 81435094 ~ 81466198 (+)

Expression


Co-expression Network