LOC110506133 (LOC106562504)


Basic Information

Item Value
gene id LOC110506133
gene name LOC106562504
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 79919963 ~ 79942131 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981045.1
ACGCGCCAATAAACCTGCGATACCGAAACTTCGTTCCGTGCGCCCGACAAATGAAAAAGTGAAGGTCGTTCCGACCAACTAAATTGCACTACTGTATTTTATAACGGATCAAACGGGAATTAATTTCCGGCTGAGACGAAAACTACCAGAAGGTGTTGTTGACCAGAGGTACAGCTACAGGCCTGTCCCTCAGCAGCACTAGTCATGTCCTCTCTGCTGCGCTGTGTCTCCTGCTGCGGCTCCACTGTCACCTTGCTCCAGCAAGGTGTTCGCCAACACACACCTGGCCGACGGGCCTTCAGGACCTTCCCACAGCTCTGGAACTGTGAGCCTGCTAAAGgaCGGCTGTATAAGGACCTGGTGGTAGGAGTTCCTAAGGAGATCTTTAAGAATGAGCGTCGTGTGGCTGTGTCCCCTGCGGGGGTGGAGCTGCTCGTCAAACAGGGCTTCAACGTCCAGGTGGAGTCTGGAGCAGGAGACCACGCTAAGTTCTCTGACCAAATGTACATAAACGCTGGAGCCTCCATCACAGACACTAACGGGGCCTTCGGATCTGACCTGGTCCTCAAGGTGAGAGCTCCAGTGTTGAACGAGGCTACTGGCAAACATGAGTCAGAGCTGCTGAAGCCTAAATCCACCCTGGTGAGCTTCATCTACCCAGCTCAGAATCCTGATCTCATGGAGATGCTGGCCCAGAGTCAGACCACCGTGCTGGCCATGGATCAGGTCCCGCGAGTCACCATCGCACAGGGCTACGACGCACTCAGCTCCATGGCTAACATTGCAGGGTACAAGGCTGTTGTTCTGGCTGCTAACCACTTTGGCAGATTCTTCACCGGCCAGATCACAGCAGCAGGGAAAGTCCCCCCAGCCAAGGTCCTGGTCATCGGAGGTGGAGTGGCTGGTTTGGCTGCAGCTGGAGCCGCCAAGTCTATGGGAGCTATCGTCAGAGGCTTTGATACCAGACCAGCAGCTCTGGAACAGTTTAAGTCGTTCGGGGCGGAGCCTTTGGAGGTGCACATTAAGGAGTCCGGGGATGGTGTTGGAGGTTACGCCAAGGAGATGTCCCCAGAGTTCATTGCAGCTGAGATGGAGTTGTTTGCCAAGCAGTGTAAAGATGTGGACATCCTCATCAGTACTGCTCTCATCCCAGGGAAGCGAGCTCCCATCCTGATCAAGACAGAGATGGTGGAGTCTATGAAGGATGGCTCTGTGGTGGTGGATCTGGCTGCTGAGGCTGGAGGAAACATTGAGACCACCAAGCCTGGAGAGCTGCACGTACACAAGGGTGTGACACACATCGGCTTCACCGACCTGCCCAGCCGCATGCCCACCCAGGCCAGCACCCTGTACTCCAACAACGTGCTCAAACTGCTCAAGGCCATCAGCCCAGACAAAGACTACTTCCACTTTGAGCCCAAAGAAGAGTTTGATCACGGGACACTGGACCACGTCATCAGAGGAACCATGGTCATGCAGGAAGGCAAGAGCCTGTTCCCATCCCCCCAACCTAAGACACAACCCCCGGCCGCTCCAGTCAAACAGAAAAGTGTAGCAGAGCTAGCGGCAGAGAAGGCAGCTGTGGTCTCACCTTTCCAGAAGACCTTGACCAACGCTGGTGTCTACACCGCAGGTCTCTCTACATGTCTGGCTCTGGGCTTGGCGGCGCCCAACTCAGCCTTCACCCAGATGGTCACTACTTTCGGCCTGGCCGGCATCGTGGGATACCACACGGTGTGGGGCGTCACCCCCGCCCTCCACTCACCCCTCATGTCCGTCACCAACGCCAtctcagGTCTGACTGCTGTGGGTGGTCTGGTCCTGATGGGGGGAggtctccacccctcctccttccccgAGGGCCTGGCTCTGGCTGCAGCCTTCGTCTCCTCCATCAACATCGCAgGTGGGTTCATGATCACCCAGAGGATGCTGGACATGTTTAAACGTCCTACAGACCCTCCAGAGTACAACTACCTGTACGGTCTTCCAATAGGAGTCTTCATAGGAGGTTACGGGGCCTCTGTGGCTGCTGGCTACCACATCGAGCAGATGATGTACCTGGGGTCTGGTATGTGCTGTGTGGGAGCATTGGCAGGGCTGTCTTCACAGGGCACCAGTCGTCTGGGTAATGCCCTGGGCATGATGGGTGTAGCAGGGGGCATCGCTGCCACTCTCGGCTCCCTGAAGCCCTCTCCTGAGCTGCTGGCACAGATGAGTGCCGCCATGGCCACCGGAGGAACCCTGGGTCTGACCATTGCTAAGCGTATTGAGATCACCGATCTCCCCCAGTTGGTAGCTGCCTTCCACAGCCTGGTGGGTCTGGCTGCAGTGCTGACCTGTGTGGCAGAGTACATGATCGAGTACCCTCACTTGGACGTACACCCTGCAGCCAACATGGTGAAGACTGTGGCCTACCTCGGCACATACATCGGAGGGGTCACCTTCAGCGGGTCACTGGTGGCCTATGGCAAGCTGCAAGGTGTTCTGAACTCCGCCCCGCTGATGTTGCCGGGGCGTCACATGATGAACGCCGGTCTGATGACGGCGTCTGTCGGTGGTATGATTCCCTTCATGCTCAGTGCTGACTACGCTACTGGCATGGGCTGTCTGGTTGGAGTGTCTGGCCTCTCCACCGTCATGGGTGTAACCCTGACGATGGCCATCGGGGGCGCTGACATGCCCGTTGTCATCACTGTGCTCAATTCCTACTCTGGTTGGGCGCTGTGTGCCGAGGGATTCCTATTGGACAACAACCTCATGACCATTGTAGGAGCTCTGATTGGCTCGTCTGGTGCTATCCTCTCCTACATCATGTGTGTGGCAATGAACCGTTCCCTGCCCAACGTGATCCTGGGAGGGTTCGGTACCAGCTCCACGGCAGGGGGAAAACCCATGGAGATCACAGGTACCCACACAGAGGTCAATGTGGACCAGTCCATCGAACTCATCAAAGAGGCCAACAGCATCATCATCACCCCAGgttgggGTCTGTGTGCGGCTAAGGCCCAGTACCCCATTGCTGACATGGTGAAGATGCTGGTAGAGCAGGGCAAGTCTGTCAGGTTTGGTATCCACCCTGTGGCAGGTCGTATGCCAGGCCAGCTAAACGTGCTCCTGGCTGAGGCAGGTGTTCCATATGACGTGGTTCTGGAGATGGATGAGATCAATGAGGACTTCAaagagactgacctgacgctggtGGTGGGTGCTAACGACACAGTGAACTCAGCAGCCCAGGAGGACCCCAACTCCATCATTGCTGGCATGCCAGTCCTGGAGGTCTGGAAGTCCAAACAGGTGATTGTGATGAAGAGGACCATGGGTGTGGGCTATGCTGCAGTAGACAATCCCATCTTCTACAAGCCCAACACATCCATGCTGCTGGGAGACGCCAAGAAGACCTGTGACACACTACAGGCCAAGATCAGAGAGGCCTACTACTAGAACAGAGatggacagtacacacacactccctatcGGCCTTACAGATGTATTTATTTGTCTTTAATCCAGATGCAGGTGTATGGTTCTGTTAAGATTAGTAAACAACGGTGAATATTTTTACACTTAGTGGCTTGATGATTATAGAGGTCCTCAGTACATATGATTATTGGACGTTGGGCAGTGATGTTGAACCAAAGGTGTGGACACGATGATTAGATTACATTTAAATTAACCCATACACTGCCTGCCCTGATTTGTAAATAAAAATCTGTTTTGAATGTGA
>XM_036981046.1
CGAAACTTCGTTCCGTGCGCCCGACAAATGAAAAAGTGAAGGTCGTTCCGACCAACTAAATTGCACTACTGTATTTTATAACGGATCAAACGGGAATTAATTTCCGGCTGAGACGAAAACTACCAGAAGGTTGGTGTTGTTGACCAGAGGTACAGCTACAGGCCTGTCCCTCAGCAGCACTAGTCATGTCCTCTCTGCTGCGCTGTGTCTCCTGCTGCGGCTCCACTGTCACCTTGCTCCAGCAAGGTGTTCGCCAACACACACCTGGCCGACGGGCCTTCAGGACCTTCCCACAGCTCTGGAACTGTGAGCCTGCTAAAGgaCGGCTGTATAAGGACCTGGTGGTAGGAGTTCCTAAGGAGATCTTTAAGAATGAGCGTCGTGTGGCTGTGTCCCCTGCGGGGGTGGAGCTGCTCGTCAAACAGGGCTTCAACGTCCAGGTGGAGTCTGGAGCAGGAGACCACGCTAAGTTCTCTGACCAAATGTACATAAACGCTGGAGCCTCCATCACAGACACTAACGGGGCCTTCGGATCTGACCTGGTCCTCAAGGTGAGAGCTCCAGTGTTGAACGAGGCTACTGGCAAACATGAGTCAGAGCTGCTGAAGCCTAAATCCACCCTGGTGAGCTTCATCTACCCAGCTCAGAATCCTGATCTCATGGAGATGCTGGCCCAGAGTCAGACCACCGTGCTGGCCATGGATCAGGTCCCGCGAGTCACCATCGCACAGGGCTACGACGCACTCAGCTCCATGGCTAACATTGCAGGGTACAAGGCTGTTGTTCTGGCTGCTAACCACTTTGGCAGATTCTTCACCGGCCAGATCACAGCAGCAGGGAAAGTCCCCCCAGCCAAGGTCCTGGTCATCGGAGGTGGAGTGGCTGGTTTGGCTGCAGCTGGAGCCGCCAAGTCTATGGGAGCTATCGTCAGAGGCTTTGATACCAGACCAGCAGCTCTGGAACAGTTTAAGTCGTTCGGGGCGGAGCCTTTGGAGGTGCACATTAAGGAGTCCGGGGATGGTGTTGGAGGTTACGCCAAGGAGATGTCCCCAGAGTTCATTGCAGCTGAGATGGAGTTGTTTGCCAAGCAGTGTAAAGATGTGGACATCCTCATCAGTACTGCTCTCATCCCAGGGAAGCGAGCTCCCATCCTGATCAAGACAGAGATGGTGGAGTCTATGAAGGATGGCTCTGTGGTGGTGGATCTGGCTGCTGAGGCTGGAGGAAACATTGAGACCACCAAGCCTGGAGAGCTGCACGTACACAAGGGTGTGACACACATCGGCTTCACCGACCTGCCCAGCCGCATGCCCACCCAGGCCAGCACCCTGTACTCCAACAACGTGCTCAAACTGCTCAAGGCCATCAGCCCAGACAAAGACTACTTCCACTTTGAGCCCAAAGAAGAGTTTGATCACGGGACACTGGACCACGTCATCAGAGGAACCATGGTCATGCAGGAAGGCAAGAGCCTGTTCCCATCCCCCCAACCTAAGACACAACCCCCGGCCGCTCCAGTCAAACAGAAAAGTGTAGCAGAGCTAGCGGCAGAGAAGGCAGCTGTGGTCTCACCTTTCCAGAAGACCTTGACCAACGCTGGTGTCTACACCGCAGGTCTCTCTACATGTCTGGCTCTGGGCTTGGCGGCGCCCAACTCAGCCTTCACCCAGATGGTCACTACTTTCGGCCTGGCCGGCATCGTGGGATACCACACGGTGTGGGGCGTCACCCCCGCCCTCCACTCACCCCTCATGTCCGTCACCAACGCCAtctcagGTCTGACTGCTGTGGGTGGTCTGGTCCTGATGGGGGGAggtctccacccctcctccttccccgAGGGCCTGGCTCTGGCTGCAGCCTTCGTCTCCTCCATCAACATCGCAgGTGGGTTCATGATCACCCAGAGGATGCTGGACATGTTTAAACGTCCTACAGACCCTCCAGAGTACAACTACCTGTACGGTCTTCCAATAGGAGTCTTCATAGGAGGTTACGGGGCCTCTGTGGCTGCTGGCTACCACATCGAGCAGATGATGTACCTGGGGTCTGGTATGTGCTGTGTGGGAGCATTGGCAGGGCTGTCTTCACAGGGCACCAGTCGTCTGGGTAATGCCCTGGGCATGATGGGTGTAGCAGGGGGCATCGCTGCCACTCTCGGCTCCCTGAAGCCCTCTCCTGAGCTGCTGGCACAGATGAGTGCCGCCATGGCCACCGGAGGAACCCTGGGTCTGACCATTGCTAAGCGTATTGAGATCACCGATCTCCCCCAGTTGGTAGCTGCCTTCCACAGCCTGGTGGGTCTGGCTGCAGTGCTGACCTGTGTGGCAGAGTACATGATCGAGTACCCTCACTTGGACGTACACCCTGCAGCCAACATGGTGAAGACTGTGGCCTACCTCGGCACATACATCGGAGGGGTCACCTTCAGCGGGTCACTGGTGGCCTATGGCAAGCTGCAAGGTGTTCTGAACTCCGCCCCGCTGATGTTGCCGGGGCGTCACATGATGAACGCCGGTCTGATGACGGCGTCTGTCGGTGGTATGATTCCCTTCATGCTCAGTGCTGACTACGCTACTGGCATGGGCTGTCTGGTTGGAGTGTCTGGCCTCTCCACCGTCATGGGTGTAACCCTGACGATGGCCATCGGGGGCGCTGACATGCCCGTTGTCATCACTGTGCTCAATTCCTACTCTGGTTGGGCGCTGTGTGCCGAGGGATTCCTATTGGACAACAACCTCATGACCATTGTAGGAGCTCTGATTGGCTCGTCTGGTGCTATCCTCTCCTACATCATGTGTGTGGCAATGAACCGTTCCCTGCCCAACGTGATCCTGGGAGGGTTCGGTACCAGCTCCACGGCAGGGGGAAAACCCATGGAGATCACAGGTACCCACACAGAGGTCAATGTGGACCAGTCCATCGAACTCATCAAAGAGGCCAACAGCATCATCATCACCCCAGgttgggGTCTGTGTGCGGCTAAGGCCCAGTACCCCATTGCTGACATGGTGAAGATGCTGGTAGAGCAGGGCAAGTCTGTCAGGTTTGGTATCCACCCTGTGGCAGGTCGTATGCCAGGCCAGCTAAACGTGCTCCTGGCTGAGGCAGGTGTTCCATATGACGTGGTTCTGGAGATGGATGAGATCAATGAGGACTTCAaagagactgacctgacgctggtGGTGGGTGCTAACGACACAGTGAACTCAGCAGCCCAGGAGGACCCCAACTCCATCATTGCTGGCATGCCAGTCCTGGAGGTCTGGAAGTCCAAACAGGTGATTGTGATGAAGAGGACCATGGGTGTGGGCTATGCTGCAGTAGACAATCCCATCTTCTACAAGCCCAACACATCCATGCTGCTGGGAGACGCCAAGAAGACCTGTGACACACTACAGGCCAAGATCAGAGAGGCCTACTACTAGAACAGAGatggacagtacacacacactccctatcGGCCTTACAGATGTATTTATTTGTCTTTAATCCAGATGCAGGTGTATGGTTCTGTTAAGATTAGTAAACAACGGTGAATATTTTTACACTTAGTGGCTTGATGATTATAGAGGTCCTCAGTACATATGATTATTGGACGTTGGGCAGTGATGTTGAACCAAAGGTGTGGACACGATGATTAGATTACATTTAAATTAACCCATACACTGCCTGCCCTGATTTGTAAATAAAAATCTGTTTTGAATGTGA

Function

NR:

description
NAD(P) transhydrogenase, mitochondrial-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008750 NAD(P)+ transhydrogenase (AB-specific) activity molecular_function
GO:0050661 NADP binding molecular_function

KEGG:

id description
K00323 NNT; H+-translocating NAD(P) transhydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981045.1 False 3730 mRNA 0.55 23 79919963 79942131
XM_036981046.1 True 3711 mRNA 0.55 23 79919986 79942131

Neighbor

gene id symbol gene type direction distance location
LOC110514990 LOC106587684 coding upstream 21612 79887514 ~ 79898351 (+)
nrk2 LOC106562430 coding upstream 59224 79857436 ~ 79860739 (+)
LOC110526648 LOC106587674 coding upstream 214359 79699361 ~ 79705604 (+)
LOC110526647 LOC106562494 coding upstream 220741 79672029 ~ 79699222 (+)
LOC110511859 myo5a coding upstream 248432 79578522 ~ 79671531 (+)
LOC118965045 LOC106562464 coding downstream 12668 79954799 ~ 80064775 (+)
LOC110506137 LOC106587708 coding downstream 151342 80093473 ~ 80106535 (+)
LOC110506794 LOC106596910 coding downstream 166424 80108555 ~ 80147068 (+)
LOC110526764 fbn1 coding downstream 224052 80166183 ~ 80317535 (+)
LOC110506798 NA coding downstream 382866 80324997 ~ 80326381 (+)
G550212 NA non-coding upstream 37271 79881854 ~ 79882692 (+)
G550195 NA non-coding upstream 68598 79851166 ~ 79851365 (+)
G550192 NA non-coding upstream 79779 79839975 ~ 79840184 (+)
G550171 NA non-coding upstream 127891 79791837 ~ 79792072 (+)
G550167 NA non-coding upstream 141426 79778280 ~ 79778537 (+)
G550222 NA non-coding downstream 2589 79944720 ~ 79945040 (+)
G550223 NA non-coding downstream 5630 79947761 ~ 79948588 (+)
G550284 NA non-coding downstream 142304 80084435 ~ 80084712 (+)
G550286 NA non-coding downstream 145707 80087838 ~ 80088156 (+)
G550288 NA non-coding downstream 148028 80090159 ~ 80090435 (+)
LOC118936661 LOC106592882 other upstream 341973 79571838 ~ 79577990 (+)
G550054 NA other upstream 439885 79479481 ~ 79480078 (+)
LOC110526645 unc13c other upstream 756932 79089592 ~ 79354959 (+)
G549345 NA other upstream 1147406 78772112 ~ 78772557 (+)
G549342 NA other upstream 1150056 78769256 ~ 78769907 (+)
G550265 NA other downstream 126617 80068748 ~ 80069285 (+)
G550305 NA other downstream 258039 80200170 ~ 80200529 (+)
myef2 myef2 other downstream 473316 80415414 ~ 80430972 (+)
G551043 NA other downstream 978576 80920707 ~ 80921436 (+)
LOC110526107 scg3 other downstream 1511365 81435094 ~ 81466198 (+)

Expression


Co-expression Network