trnap-ugg-9


Basic Information

Item Value
gene id trnap-ugg-9
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81869250 ~ 81869323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-ugg-9
Gttccgtgtggctcagttggtagagcatggcacttggaaagccagggttgtgggttcgattcccacgggggaca

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-ugg-9 True 74 mRNA 0.60 1 81869250 81869323

Neighbor

gene id symbol gene type direction distance location
LOC110506150 LOC106562517 coding upstream 8752 81815343 ~ 81860498 (+)
LOC110526974 LOC106562522 coding upstream 134290 81681884 ~ 81734963 (+)
LOC118964937 NA coding upstream 207259 81659896 ~ 81661991 (+)
LOC110506823 LOC105015051 coding upstream 301002 81551186 ~ 81568248 (+)
LOC110506821 LOC106562526 coding upstream 321909 81524807 ~ 81547341 (+)
cdkn2aip LOC106587807 coding downstream 14070 81883393 ~ 81888699 (+)
LOC110506160 LOC106562619 coding downstream 75331 81944654 ~ 82019523 (+)
LOC118964938 LOC106562620 coding downstream 152688 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 coding downstream 259446 82128769 ~ 82198551 (+)
trnaa-ugc-18 NA coding downstream 280396 82149719 ~ 82149795 (+)
G551667 NA non-coding upstream 14496 81854267 ~ 81854754 (+)
G551647 NA non-coding upstream 75640 81791890 ~ 81793610 (+)
G551646 NA non-coding upstream 78495 81790091 ~ 81790755 (+)
G551629 NA non-coding upstream 121930 81742540 ~ 81747320 (+)
G551622 NA non-coding upstream 131271 81737775 ~ 81737979 (+)
G551675 NA non-coding downstream 3070 81872393 ~ 81872616 (+)
G551678 NA non-coding downstream 9586 81878909 ~ 81880142 (+)
G551683 NA non-coding downstream 36311 81905634 ~ 81906229 (+)
G551684 NA non-coding downstream 39170 81908493 ~ 81908732 (+)
G551721 NA non-coding downstream 242712 82112035 ~ 82114356 (+)
LOC110526107 scg3 other upstream 403052 81435094 ~ 81466198 (+)
G551043 NA other upstream 947814 80920707 ~ 80921436 (+)
myef2 myef2 other upstream 1438321 80415414 ~ 80430972 (+)
G550305 NA other upstream 1668721 80200170 ~ 80200529 (+)
G551805 NA other downstream 395646 82264969 ~ 82265749 (+)
G551889 LOC106587688 other downstream 607595 82476918 ~ 82483802 (+)
LOC110526694 pcsk6 other downstream 720214 82532518 ~ 82627600 (+)

Expression


Co-expression Network