cdkn2aip (LOC106587807)


Basic Information

Item Value
gene id cdkn2aip
gene name LOC106587807
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81883393 ~ 81888699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981132.1
ATAAATGATCTCGAAGTAGCTATATCTTTGATCAAAAACATGTGGTATCTGTTGTTGCGcaatcgtgtggaagttgtagttCGACAGTCAACTTGTTTGCATCACTGGTCATGACTCATACAGCAACGGCGCTGCCTGGACAGTTTGAGTGATGgcggaggggaggagtggagaggacatTGTTTCAGAGTACCTGGACCAGAACCCCCACCTGGTCGAGTGGGTGGAGTCACTCCGAGGAGGGCATGAGACCAACAAGCAGTGGCATGCCAGACGAGAGTTTTTCCTGAGGAACATGGAGACGTTCCCCACAGTCCAGCCGGgcttccccagccccagtctggACAGGCTGCTCTCACTGTCCATATGCTGGGCCAACCACATCTTCTTGGGCTGCAGATACCCTCAACCTGTCATGGACAGGATCAAGGAAATGGCAGAGGGAGTGGTTGTCAATGATGCTCCAGTTCGAAAGACCAGAGATGAAATCTTGGGGAAAGGAAAGAGGACTGCAGGGGGCGACGACGACAGCTGCGCCAAGCGGACCAAGCCTGGGAACCCCTTCAAgcaaggccctcccccgcagGCACCGGCCGAGCACCAGCCCTTCTTCAACCGCCTCTACAAGGCTGTGGCGTGGAAGCTGGTGTCGGCAGGGGGCTTCGGCCCCAACCTGGACCACTTTGAAATCCTGCGTGCCTGCACTGAGTCGTCCAAAGAGAGCCTGAGCTGCGTCTTTGTGCCCCTGAAGGACATCCCCGACCTGCCTGCGGCGCGCTCCCAGAAGGAGGGCCAGGTGTGCGAGCTGCGCTGCCAGACAGTCTATCTGGGCACGGGCTACGGGCGTGACGAGGCAGCCGCCAGGGCCATGGCATCCAAGGAGGCCCTCAAGGCCTTCCAGGGGCGCAAGGTGATGGTGAAGATCTGCCGGCGGCGGTTCAATGGTAGGGATGTAGAGGATCTGGTGCTGCTGGATGATCAGCCCAGGAACCCGGGCTTCCCTCCCGCTATCAGCTACCCCTTCCAGCCAGAGCAGCAGGGAGACGGGCCGTCGTAGCACAGCCATGGGTCATAGAGTATCCTCCGGGGGCCTTtccagggtcatgttcagtaggcatCAAAATGTAGTAAAATAGGGACGTAGGAATGGGGGTTTGAAATAATTTCACAATTTGAATAGTATAATGAATTTTTGTCAGATATTCGAAATACATGTGTTattgttatattttgtttgttagttgttgttttttttacctgaGCACTGctgcgggagggagagaggctggcGCTCTATTGCTGCAGCTGCAGAGGGGGCGaacagatggatggagggagagagagacaccaagGCAATTCAATGTTATTTATTATCCTATATAACAGTGCCTGTCTTGACTGGAGTAGCCTAgagaagctagccagctatagctagctaggctaattgaggccaCATGCTGAGCTTTTCCCCCAACCCCATTCAGATAAAACaacagcctacctgttggttGTTATTCTTTCTCATTTCGCTAAATTTTAATTCAGTAATTTTATTCCATCTTGCATTGCATAAGTAAACTTTCATTCCACTTGTTACACATTTGGCCTCTTTTCCACGTTGATTGGCCTACATAAACAACAAGCTACACATGGCTACCGGTCTTTTTATAAAAACAACATAAAAAAGTTAGTTTTATTAAATTAATAATTTGAAATTTCTCACAAAATGTTATACTCACACAAGTATTCGAATACTCTGTTGGAATATTCGAATAACCATGCACATCCCTAACTGGGAGGAACTACCTCTCCTGGTCCAATAATACATGCTAATTTCAGTTTCTCGTTCCGAAACGTTTTGCTactgtgtgccctaatgaacacggccCTGGTATTTAGAAGTTGTGTGGGTTTGAATGGAGCTGCTCTATGAGTCATACAGTACCACTGAATGGATGGACTCAATGCATCACCACCACTTAGTCGTTTTTACGCTTTTATTATTCTTGAGGAGCGTATACCCAGTTCTTGTTCCATAGGTCATTTGGATTCCTTCAGAGTGGGGATGGTAAGAAGTTTAGTCCCTTTTAGTATCGGTTGTGCCTGTCTGCTGCCTACAACAATGGAGAAATGTACACACTTCGTAAGGGTGTGGTTCACAAAATGTCACCACATTTTCCCTCCCTTTGCTTGGGTCTATAGTCACGCCATGCACTTTCCTTCTACGTCCTCTAGCTCAGGGCTCCGGGGTGAAGTTCCCcatagatctaggatcagcttcctctcCCTCAATCCTAACCTTAGCCATTAGTCAGGAAAATGCTAAACTGCCCCAGGATCAGCCTCTAGGTGCAACGTAACCCTACACCTAGCTCAGGACTATGGTGGATAGTGCGGCTGCACTGGGTCTGACCTTCAAGCCATTTAATCAGCTATCTGATTAACAACCCGACCACTAGACGAGGGACATTTCTACCGTTTATCAATACCGTTAATAACATGCAACTAATGAATCCTGTGTGGCTCGTCATTCGAGTTTTCTATTGATGCTTCAAATCTCCCTGAGTGATCACATTACAAATGTTATGCTTTTTTTGTTTAATGAAGTTACAAAGTTAGTCATGGAATGAGAATGAGGTATACTTTTGATAATTTAACACCGGCTCTCGTATTTAAAATGCACAAGTCCTCTGACAGAATCATTATTTCAACTGTTGTTTTCTGTTCACAGTAGAATGCATTGTCACTATTATAACTCAGTGTGTTTGTCTGAATACTAACGGAGGCATCTTGTTTAGTTGTTCTGCATGATGTAGATCTTGTTGATGATGGAACTTTGACATTCATTTAAAACCACTGTGTTCTATTTTGTGTGAGGAAAGCTGTTGAGAAAATGTCAGTTTTTGTTATGTTTCTGAATTGATTCAGTAATTCTAAAGGAGATGATTGGCGTTAAGCCAGGTTCATAGAATTGTATGACATGTTTGATAGTGCTTGAGTCTTTACATTCAAAAACCATCAATGGAAGATCGCTGCTGTAATGTTTTGCTTTTCAAAGCTGAATGATATGAAATGGGTTGCATTGATGTGTAAATGGCCACAATATTTAGTGACATTTTACATTTCTATGAGCGGTCCCTGTTTCTATATTTTTGTTAATAAAAATAATTTAAGAATG
>XM_036981133.1
gccacattGGAGGATGGCTAGCTATGTAAAATATATTAACCCGGTTGATGTTAAGTTACTCACCGAATGATATGTCTGATGATAAATTAGCTAGTAACAACAGAGACGGTAATGTTAGATAATTGGCATTGCAACAAACCAACATTGACTTCCGTAAACAAGCGGTTTTCTGATTTGGCCCTACTAACGTTACGTGATATTTGTTATGATATCTAAATCGCCCTCTCCCCACAATCTCGAAGTTGTTTGGTAGGCAGTGAGGACAATAATCACAAAGAATAGATGCCAGCAGTGACTTTAAAAGATGTCAGAAGACGACTACTTCAGCTTCTGTAGCGTTATAATATTCCCTCTTAACAAGCCGCTGCTGACAAATTGCAGTGATGgcggaggggaggagtggagaggacatTGTTTCAGAGTACCTGGACCAGAACCCCCACCTGGTCGAGTGGGTGGAGTCACTCCGAGGAGGGCATGAGACCAACAAGCAGTGGCATGCCAGACGAGAGTTTTTCCTGAGGAACATGGAGACGTTCCCCACAGTCCAGCCGGgcttccccagccccagtctggACAGGCTGCTCTCACTGTCCATATGCTGGGCCAACCACATCTTCTTGGGCTGCAGATACCCTCAACCTGTCATGGACAGGATCAAGGAAATGGCAGAGGGAGTGGTTGTCAATGATGCTCCAGTTCGAAAGACCAGAGATGAAATCTTGGGGAAAGGAAAGAGGACTGCAGGGGGCGACGACGACAGCTGCGCCAAGCGGACCAAGCCTGGGAACCCCTTCAAgcaaggccctcccccgcagGCACCGGCCGAGCACCAGCCCTTCTTCAACCGCCTCTACAAGGCTGTGGCGTGGAAGCTGGTGTCGGCAGGGGGCTTCGGCCCCAACCTGGACCACTTTGAAATCCTGCGTGCCTGCACTGAGTCGTCCAAAGAGAGCCTGAGCTGCGTCTTTGTGCCCCTGAAGGACATCCCCGACCTGCCTGCGGCGCGCTCCCAGAAGGAGGGCCAGGTGTGCGAGCTGCGCTGCCAGACAGTCTATCTGGGCACGGGCTACGGGCGTGACGAGGCAGCCGCCAGGGCCATGGCATCCAAGGAGGCCCTCAAGGCCTTCCAGGGGCGCAAGGTGATGGTGAAGATCTGCCGGCGGCGGTTCAATGGTAGGGATGTAGAGGATCTGGTGCTGCTGGATGATCAGCCCAGGAACCCGGGCTTCCCTCCCGCTATCAGCTACCCCTTCCAGCCAGAGCAGCAGGGAGACGGGCCGTCGTAGCACAGCCATGGGTCATAGAGTATCCTCCGGGGGCCTTtccagggtcatgttcagtaggcatCAAAATGTAGTAAAATAGGGACGTAGGAATGGGGGTTTGAAATAATTTCACAATTTGAATAGTATAATGAATTTTTGTCAGATATTCGAAATACATGTGTTattgttatattttgtttgttagttgttgttttttttacctgaGCACTGctgcgggagggagagaggctggcGCTCTATTGCTGCAGCTGCAGAGGGGGCGaacagatggatggagggagagagagacaccaagGCAATTCAATGTTATTTATTATCCTATATAACAGTGCCTGTCTTGACTGGAGTAGCCTAgagaagctagccagctatagctagctaggctaattgaggccaCATGCTGAGCTTTTCCCCCAACCCCATTCAGATAAAACaacagcctacctgttggttGTTATTCTTTCTCATTTCGCTAAATTTTAATTCAGTAATTTTATTCCATCTTGCATTGCATAAGTAAACTTTCATTCCACTTGTTACACATTTGGCCTCTTTTCCACGTTGATTGGCCTACATAAACAACAAGCTACACATGGCTACCGGTCTTTTTATAAAAACAACATAAAAAAGTTAGTTTTATTAAATTAATAATTTGAAATTTCTCACAAAATGTTATACTCACACAAGTATTCGAATACTCTGTTGGAATATTCGAATAACCATGCACATCCCTAACTGGGAGGAACTACCTCTCCTGGTCCAATAATACATGCTAATTTCAGTTTCTCGTTCCGAAACGTTTTGCTactgtgtgccctaatgaacacggccCTGGTATTTAGAAGTTGTGTGGGTTTGAATGGAGCTGCTCTATGAGTCATACAGTACCACTGAATGGATGGACTCAATGCATCACCACCACTTAGTCGTTTTTACGCTTTTATTATTCTTGAGGAGCGTATACCCAGTTCTTGTTCCATAGGTCATTTGGATTCCTTCAGAGTGGGGATGGTAAGAAGTTTAGTCCCTTTTAGTATCGGTTGTGCCTGTCTGCTGCCTACAACAATGGAGAAATGTACACACTTCGTAAGGGTGTGGTTCACAAAATGTCACCACATTTTCCCTCCCTTTGCTTGGGTCTATAGTCACGCCATGCACTTTCCTTCTACGTCCTCTAGCTCAGGGCTCCGGGGTGAAGTTCCCcatagatctaggatcagcttcctctcCCTCAATCCTAACCTTAGCCATTAGTCAGGAAAATGCTAAACTGCCCCAGGATCAGCCTCTAGGTGCAACGTAACCCTACACCTAGCTCAGGACTATGGTGGATAGTGCGGCTGCACTGGGTCTGACCTTCAAGCCATTTAATCAGCTATCTGATTAACAACCCGACCACTAGACGAGGGACATTTCTACCGTTTATCAATACCGTTAATAACATGCAACTAATGAATCCTGTGTGGCTCGTCATTCGAGTTTTCTATTGATGCTTCAAATCTCCCTGAGTGATCACATTACAAATGTTATGCTTTTTTTGTTTAATGAAGTTACAAAGTTAGTCATGGAATGAGAATGAGGTATACTTTTGATAATTTAACACCGGCTCTCGTATTTAAAATGCACAAGTCCTCTGACAGAATCATTATTTCAACTGTTGTTTTCTGTTCACAGTAGAATGCATTGTCACTATTATAACTCAGTGTGTTTGTCTGAATACTAACGGAGGCATCTTGTTTAGTTGTTCTGCATGATGTAGATCTTGTTGATGATGGAACTTTGACATTCATTTAAAACCACTGTGTTCTATTTTGTGTGAGGAAAGCTGTTGAGAAAATGTCAGTTTTTGTTATGTTTCTGAATTGATTCAGTAATTCTAAAGGAGATGATTGGCGTTAAGCCAGGTTCATAGAATTGTATGACATGTTTGATAGTGCTTGAGTCTTTACATTCAAAAACCATCAATGGAAGATCGCTGCTGTAATGTTTTGCTTTTCAAAGCTGAATGATATGAAATGGGTTGCATTGATGTGTAAATGGCCACAATATTTAGTGACATTTTACATTTCTATGAGCGGTCCCTGTTTCTATATTTTTGTTAATAAAAATAATTTAAGAATG

Function

NR:

description
protein CDKN2AIP homolog A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981132.1 False 3178 mRNA 0.46 4 81883393 81888699
XM_036981133.1 True 3410 mRNA 0.45 4 81883750 81888699

Neighbor

gene id symbol gene type direction distance location
trnap-ugg-9 NA coding upstream 14070 81869250 ~ 81869323 (+)
LOC110506150 LOC106562517 coding upstream 22895 81815343 ~ 81860498 (+)
LOC110526974 LOC106562522 coding upstream 148433 81681884 ~ 81734963 (+)
LOC118964937 NA coding upstream 221402 81659896 ~ 81661991 (+)
LOC110506823 LOC105015051 coding upstream 315145 81551186 ~ 81568248 (+)
LOC110506160 LOC106562619 coding downstream 55955 81944654 ~ 82019523 (+)
LOC118964938 LOC106562620 coding downstream 133312 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 coding downstream 240070 82128769 ~ 82198551 (+)
trnaa-ugc-18 NA coding downstream 261020 82149719 ~ 82149795 (+)
LOC110526669 hypk coding downstream 363153 82251852 ~ 82253308 (+)
G551678 NA non-coding upstream 3251 81878909 ~ 81880142 (+)
G551675 NA non-coding upstream 10777 81872393 ~ 81872616 (+)
G551667 NA non-coding upstream 28639 81854267 ~ 81854754 (+)
G551647 NA non-coding upstream 89783 81791890 ~ 81793610 (+)
G551646 NA non-coding upstream 92638 81790091 ~ 81790755 (+)
G551683 NA non-coding downstream 16935 81905634 ~ 81906229 (+)
G551684 NA non-coding downstream 19794 81908493 ~ 81908732 (+)
G551721 NA non-coding downstream 223336 82112035 ~ 82114356 (+)
G551752 NA non-coding downstream 226693 82115392 ~ 82115740 (+)
G551770 NA non-coding downstream 265929 82154628 ~ 82155340 (+)
LOC110526107 scg3 other upstream 417195 81435094 ~ 81466198 (+)
G551043 NA other upstream 961957 80920707 ~ 80921436 (+)
myef2 myef2 other upstream 1452464 80415414 ~ 80430972 (+)
G550305 NA other upstream 1682864 80200170 ~ 80200529 (+)
G551805 NA other downstream 376270 82264969 ~ 82265749 (+)
G551889 LOC106587688 other downstream 588219 82476918 ~ 82483802 (+)
LOC110526694 pcsk6 other downstream 700838 82532518 ~ 82627600 (+)

Expression


Co-expression Network