Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526981 |
| gene name | LOC106562637 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 82382159 ~ 82385754 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| programmed cell death protein 7 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036981171.1 | False | 2277 | mRNA | 0.51 | 5 | 82382159 | 82385754 |
| XM_036981172.1 | True | 1113 | mRNA | 0.51 | 5 | 82382159 | 82385754 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936662 | LOC106562636 | coding | downstream | 148 | 82366807 ~ 82382011 (-) |
| LOC110526682 | rasl12 | coding | downstream | 20448 | 82355303 ~ 82361711 (-) |
| LOC118964941 | LOC106587699 | coding | downstream | 34737 | 82343326 ~ 82347422 (-) |
| LOC118964940 | NA | coding | downstream | 74028 | 82306132 ~ 82308131 (-) |
| LOC110526672 | LOC106562627 | coding | downstream | 86216 | 82289698 ~ 82295943 (-) |
| LOC110526686 | LOC106562638 | coding | upstream | 3687 | 82389441 ~ 82408265 (-) |
| LOC110526982 | ankdd1a | coding | upstream | 40340 | 82426094 ~ 82444978 (-) |
| LOC110526691 | LOC106562597 | coding | upstream | 95805 | 82481559 ~ 82505982 (-) |
| LOC110526698 | LOC106562729 | coding | upstream | 260969 | 82646723 ~ 82657356 (-) |
| LOC110526699 | LOC106587711 | coding | upstream | 292848 | 82678602 ~ 82692385 (-) |
| G552458 | NA | non-coding | downstream | 24129 | 82357823 ~ 82358030 (-) |
| G552452 | NA | non-coding | downstream | 42434 | 82336908 ~ 82339725 (-) |
| G552419 | NA | non-coding | downstream | 123121 | 82258724 ~ 82259038 (-) |
| LOC110517630 | serinc4 | non-coding | downstream | 132013 | 82200527 ~ 82250360 (-) |
| G552404 | NA | non-coding | downstream | 157003 | 82224725 ~ 82225156 (-) |
| G552481 | NA | non-coding | upstream | 35602 | 82421356 ~ 82421698 (-) |
| G552499 | NA | non-coding | upstream | 70556 | 82456310 ~ 82457034 (-) |
| G552501 | NA | non-coding | upstream | 80749 | 82466503 ~ 82467953 (-) |
| G552518 | NA | non-coding | upstream | 130646 | 82516400 ~ 82516737 (-) |
| cartl | LOC106562433 | other | downstream | 442627 | 81936960 ~ 81939563 (-) |
| LOC110519456 | cart | other | downstream | 488046 | 81893009 ~ 81894165 (-) |
| LOC110506838 | tubgcp4 | other | downstream | 498928 | 81860488 ~ 81883263 (-) |
| G552229 | NA | other | downstream | 525725 | 81853101 ~ 81856434 (-) |
| G551604 | NA | other | downstream | 722905 | 81657652 ~ 81659254 (-) |
| G552533 | pcsk6 | other | upstream | 178704 | 82564458 ~ 82566619 (-) |
| G552571 | NA | other | upstream | 224164 | 82609918 ~ 82617194 (-) |
| G552558 | NA | other | upstream | 227803 | 82612678 ~ 82620244 (-) |
