Item | Value |
---|---|
gene id | LOC110506177 |
gene name | LOC106562591 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 84478032 ~ 84689839 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 17 isoform X2 |
id | description |
---|---|
K08631 | ADAMTS17; a disintegrin and metalloproteinase with thrombospondin motifs 17 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036981244.1 | False | 6821 | mRNA | 0.49 | 24 | 84478032 | 84689839 |
XM_036981246.1 | False | 6809 | mRNA | 0.49 | 24 | 84478032 | 84689839 |
XM_036981247.1 | False | 3483 | mRNA | 0.57 | 23 | 84481295 | 84689839 |
XM_036981248.1 | True | 3471 | mRNA | 0.57 | 23 | 84481295 | 84689839 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110512412 | LOC106562588 | coding | downstream | 64802 | 84363849 ~ 84413230 (-) |
LOC110506894 | LOC106562661 | coding | downstream | 75863 | 84399741 ~ 84402169 (-) |
LOC118964948 | NA | coding | downstream | 197464 | 84278897 ~ 84280568 (-) |
LOC118964949 | NA | coding | downstream | 199177 | 84278255 ~ 84278855 (-) |
LOC110506882 | LOC106562652 | coding | downstream | 210078 | 84250996 ~ 84267954 (-) |
LOC110517996 | cers3 | coding | upstream | 9292 | 84699131 ~ 84727986 (-) |
LOC110517994 | LOC106587824 | coding | upstream | 38662 | 84728501 ~ 84733986 (-) |
LOC110514692 | chsy1 | coding | upstream | 305027 | 84994866 ~ 85084084 (-) |
LOC110514693 | sels | coding | upstream | 394790 | 85084629 ~ 85092097 (-) |
LOC110506187 | tecta | coding | upstream | 441715 | 85131554 ~ 85150613 (-) |
G553804 | NA | non-coding | downstream | 115171 | 84362558 ~ 84362861 (-) |
G553791 | NA | non-coding | downstream | 123226 | 84354500 ~ 84354806 (-) |
G553789 | NA | non-coding | downstream | 125252 | 84352573 ~ 84352780 (-) |
G553783 | NA | non-coding | downstream | 141522 | 84336145 ~ 84336510 (-) |
G554201 | NA | non-coding | upstream | 960 | 84690799 ~ 84691028 (-) |
G554216 | NA | non-coding | upstream | 49716 | 84739555 ~ 84739826 (-) |
G554217 | NA | non-coding | upstream | 50426 | 84740265 ~ 84740534 (-) |
G554219 | NA | non-coding | upstream | 56841 | 84746680 ~ 84747754 (-) |
G554221 | NA | non-coding | upstream | 64556 | 84754395 ~ 84754693 (-) |
G553707 | NA | other | downstream | 303010 | 84098012 ~ 84175022 (-) |
LOC110526720 | LOC106562647 | other | downstream | 523802 | 83925574 ~ 83954299 (-) |
G553491 | NA | other | downstream | 598528 | 83876214 ~ 83879504 (-) |
G552980 | NA | other | downstream | 1104836 | 83345201 ~ 83373196 (-) |
G552584 | LOC106587709 | other | downstream | 1811587 | 82665477 ~ 82666445 (-) |
G554286 | LOC106591282 | other | upstream | 210529 | 84900368 ~ 84914202 (-) |
G554658 | NA | other | upstream | 520915 | 85210754 ~ 85211990 (-) |
G554679 | NA | other | upstream | 551160 | 85240999 ~ 85317114 (-) |
LOC110506192 | LOC106593648 | other | upstream | 914577 | 85604261 ~ 85643457 (-) |