LOC110506925 (LOC106591450)


Basic Information

Item Value
gene id LOC110506925
gene name LOC106591450
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 85188254 ~ 85197641 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981283.1
ATGGGTCAAGCAGAGAGCCACAATGAGATGGATTTGGAGCAAATTCAGGAGCTGTGTATGGCTTTTATGAAGGAGTGCCCGAGCGGTGCTTTGCACCTACATGAATTAAAACGGATCTTTTGTATACCAGCCAGCTGCGAGGAAGAGACTTTGTACATTGAGACTGTCTTCCATTCATTCGACACAAACAGGGATAACGCGTTGGATTTTATGGAGTATACAGCCGCTCTTCATCTGATATTGCGGGGGAATCTTGAGGATAGATTGAAGTGGTCCTTTAAAATCTACGACAAGGACGGGAATGGCAAGTTAGACCGAGAAGAGGTGAAAAACCTAATTCGGATCATTTACAAAATCAAAATTCATACAACTGCCATAAACATGACACCTAATGAAGTCTGTGACAGGATCTTTGAGCTGGTCGACCAGAATCATGACGGCCAGATTTCCTTTACTGAGTTCATGGAGGGGGCCCAGAAGGACGAGTGGGTCATGAATATGCTCAAGCTGGACGTCAACGCTAGTGGCTGGGTCATGCAGAACTGTGTAAAAATGACCTGAGCCCTCCAAACAGgctctcccatctacacagagagGG

Function

NR:

description
guanylyl cyclase-activating protein 2-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981283.1 True 598 mRNA 0.46 4 85188254 85197641

Neighbor

gene id symbol gene type direction distance location
LOC118965049 NA coding upstream 3930 85183179 ~ 85184324 (+)
LOC110506923 LOC106562745 coding upstream 20551 85155028 ~ 85167703 (+)
LOC110506919 LOC106593804 coding upstream 61941 85124191 ~ 85126313 (+)
LOC110506910 snrpa1 coding upstream 80954 85104148 ~ 85107300 (+)
trnaa-ugc-19 NA coding upstream 107730 85080452 ~ 85080524 (+)
LOC118965050 NA coding downstream 20049 85217690 ~ 85221093 (+)
LOC110506188 LOC106562741 coding downstream 24272 85221913 ~ 85273940 (+)
LOC110506914 NA coding downstream 95634 85293275 ~ 85303490 (+)
cstf3 cstf3 coding downstream 380471 85578112 ~ 85596032 (+)
wt1b LOC106587831 coding downstream 499782 85697423 ~ 85718907 (+)
G554401 NA non-coding upstream 14951 85173013 ~ 85173303 (+)
G554372 NA non-coding upstream 16059 85169027 ~ 85172195 (+)
G554395 NA non-coding upstream 27297 85159984 ~ 85160957 (+)
G554383 NA non-coding upstream 42501 85133571 ~ 85145753 (+)
G554419 NA non-coding downstream 2053 85199694 ~ 85204517 (+)
G554411 NA non-coding downstream 8568 85206209 ~ 85212316 (+)
G554422 NA non-coding downstream 26867 85224508 ~ 85224740 (+)
G554426 NA non-coding downstream 31774 85229415 ~ 85229642 (+)
G554427 NA non-coding downstream 33720 85231361 ~ 85231850 (+)
G554363 NA other upstream 98727 85088904 ~ 85089527 (+)
G554100 LOC106587790 other upstream 107918 85079852 ~ 85080336 (+)
LOC110526993 LOC106562571 other upstream 216704 84819145 ~ 84971574 (+)
G554013 NA other upstream 330321 84855908 ~ 84857933 (+)
G554423 NA other downstream 27121 85224762 ~ 85225164 (+)
LOC110526726 pax6 other downstream 606204 85781791 ~ 85806164 (+)
G554907 NA other downstream 615004 85812645 ~ 85814303 (+)
LOC118964953 LOC106594589 other downstream 974043 86171652 ~ 86291885 (+)
G555192 NA other downstream 1094437 86292078 ~ 86293881 (+)

Expression


Co-expression Network