LOC118965050


Basic Information

Item Value
gene id LOC118965050
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 85217690 ~ 85221093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981791.1
ATGGGTCAGTCGCACAGTGAGCTAGACGACGAGGTGGCCCTCACACATATCCAGGAACTTTACCGAAAGTTCGATATGTTCGATAAGATACGAATTAAAGgtaagcaggacaacacaCTAGACTTTATGGGGTATGTGGCAGCAGTGCACCTCGTTCTTAGAGGAAAGCTCGAGGACCGACTGAGGTCTTCTTTCAAATTTTATGACAGAGATGGAAACGGACACCTTGACAAAAAGGAGCTAAAACCAGTTGTCAAAatcatctacAATATCAAGAGGCATGGGAACCCATCTGAAACGGAGAACCTGACCCCTGATCAAATCACTGACCGGATCTTTGACCTGGTGGATAAGAATAAAGATGGCCAGATTTCCCTGGAGGAAAATTCCTggatggggatgggatgggagtTCCTGGATGGGGCTCAGAAGGACCAGTGGGTGCTGGACCAGCTCCAGCTGGACATAAGGCCCTGTGGGTGGTTCCTAGAATAGCAGAGGAATAATGTGGAGGAAGAACTGCAGAGGAAGAACAACAAGTGACCTTCAAGGGATTGGATTCCTGCAACGATATTTGTAAGATATATA

Function

NR:

description
guanylyl cyclase-activating protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981791.1 True 588 mRNA 0.47 4 85217690 85221093

Neighbor

gene id symbol gene type direction distance location
LOC110506925 LOC106591450 coding upstream 20049 85188254 ~ 85197641 (+)
LOC118965049 NA coding upstream 33366 85183179 ~ 85184324 (+)
LOC110506923 LOC106562745 coding upstream 49987 85155028 ~ 85167703 (+)
LOC110506919 LOC106593804 coding upstream 91377 85124191 ~ 85126313 (+)
LOC110506910 snrpa1 coding upstream 110390 85104148 ~ 85107300 (+)
LOC110506188 LOC106562741 coding downstream 820 85221913 ~ 85273940 (+)
LOC110506914 NA coding downstream 72182 85293275 ~ 85303490 (+)
cstf3 cstf3 coding downstream 357019 85578112 ~ 85596032 (+)
wt1b LOC106587831 coding downstream 476330 85697423 ~ 85718907 (+)
LOC110526726 pax6 coding downstream 560698 85781791 ~ 85806164 (+)
G554411 NA non-coding upstream 5374 85206209 ~ 85212316 (+)
G554419 NA non-coding upstream 13173 85199694 ~ 85204517 (+)
G554418 NA non-coding upstream 23894 85193195 ~ 85193796 (+)
G554417 NA non-coding upstream 26101 85191184 ~ 85191589 (+)
G554422 NA non-coding downstream 3415 85224508 ~ 85224740 (+)
G554426 NA non-coding downstream 8322 85229415 ~ 85229642 (+)
G554427 NA non-coding downstream 10268 85231361 ~ 85231850 (+)
G554430 NA non-coding downstream 40100 85261193 ~ 85261511 (+)
G554363 NA other upstream 128163 85088904 ~ 85089527 (+)
G554100 LOC106587790 other upstream 137354 85079852 ~ 85080336 (+)
LOC110526993 LOC106562571 other upstream 246140 84819145 ~ 84971574 (+)
G554013 NA other upstream 359757 84855908 ~ 84857933 (+)
G554423 NA other downstream 3669 85224762 ~ 85225164 (+)
G554907 NA other downstream 591552 85812645 ~ 85814303 (+)
LOC118964953 LOC106594589 other downstream 950591 86171652 ~ 86291885 (+)
G555192 NA other downstream 1070985 86292078 ~ 86293881 (+)

Expression


Co-expression Network