wt1b (LOC106587831)


Basic Information

Item Value
gene id wt1b
gene name LOC106587831
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 85697423 ~ 85718907 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979128.1
CCTTCAGCAGTGTAAGGAAAACCAGACATCACACTCAGAGACAAGGCACTGTTACTactacacacactcccacacagcaCAGCATCCACACGGCTGTGATACTACACTCTCTGGCCTGTCCACTGAACTGACAACCTGAACACTCTACGACTCCATTGGACGATCGCTGaaatggactgaaacagagaGGATCCAAGTGGAAAAAGATGGTTCGTTGGTGGACTTTTTGACTTTGCGTTCAGTTCCGGGTTAAATCGCACCGAAGAGAAGTTGCCTTGACTATTTTTTCAATATTTTTCTTCACTGTTCCTAAGGAGGCTCTCACACCCATACATAGTTAGATTTTTCGACTATCCTCCTCTCTGCGCCTCAGGAGTCTGTTCCAGTCTCTGCCTCTCAGGGGGTTGTGTTTTTCAGGGTCCATCTCCTGCCATCCTCCATGATGCTGACAGAGCCGTATGGGATGATGGGGTCCATGGGTTCCGAGGTGCGAGACCTGAGCTCTCTCTTACCCCCGGTGCCCTCCGTACCTTCCCTATCAGTGAGCAGCGGGGGCTGTGGCCTGCCCGTTGGGGGTGCCCCTCAGTGGGCACCTTACCTGGACCTCCACCCTGGCTCTCCCTACGGTTCCCTGCCCTCCCACCACTCCCTCATCAAGCAGGAGCCTGGCTGGGGCTCCACGGACCCTCTGGAGGACCCTCACTGTGGCCTGGGGGCCTTCACGTTGCACTTCTCTGGCCAGTTCACTGGGACAAGCCCCTGTCGGGTTGGGGCCTTCGGTGAGCCAGCTCCAAGCCAGTCCAGGGTGTTTCCTAATGGAGCCTACCTCCCAGGCTGTGTGGACAGCCCGCCGACCCACAGGAACCAGGGTTATGGGACAGTAGGTCTGGACGGGGCTCCCAGCTATGGTCACACTCCGTCTCAACACTCCCCTCAGTTCTCCTGTCATTCATTCAAACACGAGGACATCCTGTCCCCTCCAACTACCATGGGTGACCAGCAGTACCCTGCCCCTCCCCCCATGTTTGGTTGCCACCCCCCCTCAGAGAACTGTCCAACCAGCCAGGCTCTACTGCTGAGGAACTATAACAGTGATAACTTGTACCAGATGGCCTCTCAGCTGGAGTGTGTAGCGTGGAACCCTGCTAACACACTGTCCACCATCAAAAGTCATGGGACAGGACATGAGAGTGACCCCACGGCCCCCCCTCCTCCGGTGGTCCTCAGCTGTAGTGCCCAGTACCACATCCACACACACGGCCTCTACAGAGGACTACAGgatGTGAGGCGGGTGCCTGGTATCACACCGTCTGTGGTGAGGTCATCAGAGACCAATGAGAAGCGTCCGTTTGTGTGTGCCTACCCCGGCTGCAATAAGAGATACTTCAAACTTTCCCACCTGCAGATGCATGGCAGGAAACACACGGGAGAAAAGCCGTATCAGTGTGACTTCACAGACTGTGGACGGAGATTCTCCAGATCAGATCAACTGAAGAGACACCAACgcagacacacaggagtGAAACCATTCCAGTGTGAGACGTGTCAGAGAAAGTTTTCACGGTCAGACCATCTTAAGACACACACTCGGACACATACAGgtGAGAAGCCCTTTACATGCCGCTGGTCCAGCTGTCAGAAGAAGTTTGCCAGGTCTGATGAGTTAGTTCGCCACCACAGCATGCACCAGAGGAACCTGATCAAATTACAGTCTGCCATCTGACCAGTACTAAACCGGtttggactggactagactggattGGACCGTACCAAACGCATAGCCATCTGACCAGTACTAAACCGGtttggactggactagactggattGGACCGTACCAAACGCATAGCCATCTGAGCAACAATGATGACTGGACCTAAGCCCACCGAGTGCCATAAGTGGAAAGTACAACTCAAATATGGCCTCTATTGCTCCAACTAAAGAACATAGTTTCACCATGCACCCCTTTGGATGGAAGACGAACAGATCAATGCCACCTCAGATTTATGTCACATCAGCCAATGAATATCAACGGTTACTGTAGCTTCAACCCCTGATAACCCTGTACTAGGATTCCCTGTTTTTATTGTTATAAATCAAATAGTTGATATTTTTCTTATGTACACAACCAGCTTCATCCTGAGACATGATTAAGAATCTGCTGTCTGGGTGAGAAGAACATCAGTTgttattattttgttgttgtattatAATTGCACTGGCTTTATGTTCATTTTTCTGCCATAAATGTtttactacagatgtaggatcttaatttgacacGGTTTGCTACAGCAAGAAAATAATACGGCAGCAACAAGAAAtgggaattattatgtggattataattaatagaCATTTAAGTTGGGGTTGATatattttttgtaagggaaaatcaagtctgaaatttcaaattgGAAATtataaacttcagaagccttttaaaacctcaAACAAGTTTGACATTTCCTGcatatcaaattaagatcctagacCTGTATGTACTGGAGCTAGACCATGTAAACTGGAGTTAGGAAACAGACAATGTCACTCTATGTCCAACGAGACAACGAGTAAAACAGAAAATGATACTGTGATTGTTGGAGGAAATGTGTACATGTGTTTTATGTGCCTACAGTGTAAAATGTCACTTCCTTTGTGTATATATGACTCCTTGCTATCCTTTTTAAACAGTCGTTTTGTATTTTTGTACTgttcaaatgtattaaatgttgATCTTTTGGTCA
>NM_001124602.1
GGCACTGTTACTactacacacactcccacacagcaCAGCATCCACACGGCTGTGATACTACACTCTCTGGCCTGTCCACTGAACTGACAACCTGAACACTCTACGACTCCATTGGACGATCGCTGaaatggactgaaacagagaGGATCCAAGTGGAAAAAGATGGTTCGTTGGTGGACTTTTTGACTTTGCGTTCAGTTCCGGGTTAAATCGCACCGAAGAGAAGTTGCCTTGACTATTTTTTCAATATTTTTCTTCACTGTTCCTAAGGAGGCTCTCACACCCATACATAGTTAGATTTTTCGACTATCCTCCTCTCTGCGCCTCAGGAGTCTGTTCCAGTCTCTGCCTCTCAGGGGGTTGTGTTTTTCAGGGTCCATCTCCTGCCATCCTCCATGATGCTGACAGAGCCGTATGGGATGATGGGGTCCATGGGTTCCGAGGTGCGAGACCTGAGCTCTCTCTTACCCCCGGTGCCCTCCGTACCTTCCCTATCAGTGAGCAGCGGGGGCTGTGGCCTGCCCGTTGGGGGTGCCCCTCAGTGGGCACCTTACCTGGACCTCCACCCTGGCTCTCCCTACGGTTCCCTGCCCTCCCACCACTCCCTCATCAAGCAGGAGCCTGGCTGGGGCTCCACGGACCCTCTGGAGGACCCTCACTGTGGCCTGGGGGCCTTCACGTTGCACTTCTCTGGCCAGTTCACTGGGACAAGCCCCTGTCGGGTTGGGGCCTTCGGTGAGCCAGCTCCAAGCCAGTCCAGGGTGTTTCCTAATGGAGCCTACCTCCCAGGCTGTGTGGACAGCCCGCCGACCCACAGGAACCAGGGTTATGGGACAGTAGGTCTGGACGGGGCTCCCAGCTATGGTCACACTCCGTCTCAACACTCCCCTCAGTTCTCCTGTCATTCATTCAAACACGAGGACATCCTGTCCCCTCCAACTACCATGGGTGACCAGCAGTACCCTGCCCCTCCCCCCATGTTTGGTTGCCACCCCCCCTCAGAGAACTGTCCAACCAGCCAGGCTCTACTGCTGAGGAACTATAACAGTGATAACTTGTACCAGATGGCCTCTCAGCTGGAGTGTGTAGCGTGGAACCCTGCTAACACACTGTCCACCATCAAAAGTCATGGGACAGGACATGAGAGTGACCCCACGGCCCCCCCTCCTCCGGTGGTCCTCAGCTGTAGTGCCCAGTACCACATCCACACACACGGCCTCTACAGAGGACTACAGgatGTGAGGCGGGTGCCTGGTATCACACCGTCTGTGGTGAGGTCATCAGAGACCAATGAGAAGCGTCCGTTTGTGTGTGCCTACCCCGGCTGCAATAAGAGATACTTCAAACTTTCCCACCTGCAGATGCATGGCAGGAAACACACGGGAGAAAAGCCGTATCAGTGTGACTTCACAGACTGTGGACGGAGATTCTCCAGATCAGATCAACTGAAGAGACACCAACgcagacacacaggagtGAAACCATTCCAGTGTGAGACGTGTCAGAGAAAGTTTTCACGGTCAGACCATCTTAAGACACACACTCGGACACATACAGGTAAAACAAgtGAGAAGCCCTTTACATGCCGCTGGTCCAGCTGTCAGAAGAAGTTTGCCAGGTCTGATGAGTTAGTTCGCCACCACAGCATGCACCAGAGGAACCTGATCAAATTACAGTCTGCCATCTGACCAGTACTAAACCGGtttggactggactagactggattGGACCGTACCAAACGCATAGCCATCTGACCAGTACTAAACCGGtttggactggactagactggattGGACCGTACCAAACGCATAGCCATCTGAGCAACAATGATGACTGGACCTAAGCCCACCGAGTGCCATAAGTGGAAAGTACAACTCAAATATGGCCTCTATTGCTCCAACTAAAGAACATAGTTTCACCATGCACCCCTTTGGATGGAAGACGAACAGATCAATGCCACCTCAGATTTATGTCACATCAGCCAATGAATATCAACGGTTACTGTAGCTTCAACCCCTGATAACCCTGTACTAGGATTCCCTGTTTTTATTGTTATAAATCAAATAGTTGATATTTTTCTTATGTACACAACCAGCTTCATCCTGAGACATGATTAAGAATCTGCTGTCTGGGTGAGAAGAACATCAGTTgttattattttgttgttgtattatAATTGCACTGGCTTTATGTTCATTTTTCTGCCATAAATGTtttactacagatgtaggatcttaatttgacacGGTTTGCTACAGCAAGAAAATAATACGGCAGCAACAAGAAA

Function

NR:

description
PREDICTED: Wilms tumor protein homolog isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979128.1 False 2745 mRNA 0.48 9 85697423 85718907
NM_001124602.1 True 2287 mRNA 0.51 9 85697467 85718484

Neighbor

gene id symbol gene type direction distance location
cstf3 cstf3 coding upstream 101391 85578112 ~ 85596032 (+)
LOC110506914 NA coding upstream 393933 85293275 ~ 85303490 (+)
LOC110506188 LOC106562741 coding upstream 423483 85221913 ~ 85273940 (+)
LOC118965050 NA coding upstream 476330 85217690 ~ 85221093 (+)
LOC110506925 LOC106591450 coding upstream 499782 85188254 ~ 85197641 (+)
LOC110526726 pax6 coding downstream 62884 85781791 ~ 85806164 (+)
LOC110526731 LOC107719794 coding downstream 215771 85934678 ~ 85957181 (+)
LOC118965088 NA coding downstream 350381 86069288 ~ 86069806 (+)
LOC118964953 LOC106594589 coding downstream 452745 86171652 ~ 86291885 (+)
LOC118965051 NA coding downstream 603337 86322244 ~ 86323503 (+)
G554840 NA non-coding upstream 4101 85693107 ~ 85693322 (+)
G554838 NA non-coding upstream 5072 85692136 ~ 85692351 (+)
G554836 NA non-coding upstream 6347 85690838 ~ 85691076 (+)
G554593 NA non-coding upstream 18518 85669384 ~ 85678905 (+)
G554589 NA non-coding upstream 34411 85662501 ~ 85663012 (+)
G554858 NA non-coding downstream 7180 85726087 ~ 85728807 (+)
G554878 NA non-coding downstream 16647 85735554 ~ 85735771 (+)
G554884 NA non-coding downstream 20655 85739562 ~ 85739788 (+)
G554889 NA non-coding downstream 27038 85745945 ~ 85746295 (+)
G554892 NA non-coding downstream 33606 85752513 ~ 85752771 (+)
G554423 NA other upstream 472259 85224762 ~ 85225164 (+)
LOC110506910 snrpa1 other upstream 590437 85104148 ~ 85107300 (+)
G554363 NA other upstream 607896 85088904 ~ 85089527 (+)
G554100 LOC106587790 other upstream 617087 85079852 ~ 85080336 (+)
LOC110526993 LOC106562571 other upstream 725873 84819145 ~ 84971574 (+)
G554907 NA other downstream 93738 85812645 ~ 85814303 (+)
G555192 NA other downstream 573171 86292078 ~ 86293881 (+)
LOC118964955 LOC106592958 other downstream 632039 86350925 ~ 86353193 (+)

Expression


Co-expression Network