LOC110526102 (LOC106587651)


Basic Information

Item Value
gene id LOC110526102
gene name LOC106587651
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 86353838 ~ 86366007 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981329.1
GAGAGCAACTTGTTGCTTCAAACCGATTTCAAACAGCCAACGTGCGCGCCCCTGTCTCTCCAGCTCCCGAGCGCCGCCGTCCACACCGCGCTTTCGTCGATCCAAAATTCCGTCTGTCTCACGTGCTTTGTGAATATAAAAGCTCTCTTGTTTCCCTTCATCATGTCTAGTGTGTCACCAGACAAACGGCGAAAGATGGAGTCGGCGTTGGAGCAGCTGAAGAAACACACAGTGGTCGTGGCGGACACCGGAGACTTCAACGccattgaagagtacAAGCCCCAGGATGCCACCACCAACCCCTCCCTCATCCTGGCTGCTGCCAAGATGGCCGCCTACCAGCATCTGGTCGACCAGGCCATCAAATACGGCATCGCCAAGGGCGGATCTGAGGAGGAGCAGGTCACCAACACCATGGACAAGCTGTTTGTGAGCTTCGGCCTGGAGATCCTGAAGAAGATCCCAGGCAGGGTCTCCACGGAGGTAGACGCCAGGCTTTCGTACGATAAGGATGAGATGGTGTCTCGGGCCCTGGGGCTCATTGCCTTGTACGAAGAGGCTGGTATCAAGAAGGACCGTGTTCTCATCAAGCTCTCCTCAACATGGGAAGGCATCCAGGCTGGCAGggAGCTGGAGGAGAAGCACGGGGTCCACTGCAACATGACCCTGCTGTTCTCCTTCGCCCAGGCAGTGGCCTGCGCCGAGGCCAAAGTCACCCTCATTTCACCCTTTGTGGGCCGTATCATGGACTGGTACAAGGAGAACACTGACCAGAAGAGCTACGAGGCCCATGAGGACCCAGGTGTGATCAGTGTGACCAAGATCTACAACCACTACAAGAAGTATGACTATACCACGGTGGTGATGGGAGCTTCATTCAGGAACACCGGGGAGGTCAAGGCCTTGGCCGGCTGTGACCTGCTTACCATTTCCCCCGGCCTCCTGGGAGAGCTGAGCAAAGACCACAGCACAGTCACACCAATGCTCACGGTTCAGAAAGCCAAGGCCTGTGATTTGGAGAAGGTTCACCTGGATGAGAAAGAATTCCGCTGGCAACACAACGAGGACCGCATGGCCGTGGAGAAGCTCTCGGACGGCATCCGCAAGTTCGCTGCCGACGCCATCAAGCTGGAGACCATGATCAAGGAGAAGATGCTGAATGTGAAGAACGGCCAGTAAAGAGGGACCAGATGTTCAACCCTCCCAGCAGGAAACGATGACTGTTGTGCAACAACCACCACTGGGGCCCCAAGGGACCAACTCTCCCACCTCCCCTGACCCCCAAAGTGGGACCCCCTCAACATGAATGACTTGCCACTATAGGCCTGGATTGACTCTAATTTACTGTATTTTTGTCTTTACTCAATGCAGAGATTGATTTAAATTGTGAATCCAGCACTGATGCAATGCTATTTTTGTTACTTGCAGCACTGTAGATTTGGTCAGAGGAACGAACACAACGGTCAGGCTCGGTCCAGTCTTTTTACGCATCAGCCCTTTAGTGATCTAGAAAAACAACTTCAAACTGTAACAATTATGAACATTCCTCAGGAAAATGATTTAACAGTTTCACAAATTAAACTCTTTCCTCAGT

Function

NR:

description
transaldolase-like

GO:

id name namespace
GO:0006098 pentose-phosphate shunt biological_process
GO:0005737 cytoplasm cellular_component
GO:0004801 sedoheptulose-7-phosphate molecular_function

KEGG:

id description
K00616 E2.2.1.2, talA, talB; transaldolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981329.1 True 1594 mRNA 0.53 8 86353838 86366007
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Neighbor

gene id symbol gene type direction distance location
LOC118964955 LOC106592958 coding upstream 645 86350925 ~ 86353193 (+)
LOC110526100 LOC106593965 coding upstream 4777 86346481 ~ 86349061 (+)
LOC118965051 NA coding upstream 30335 86322244 ~ 86323503 (+)
LOC118964953 LOC106594589 coding upstream 61953 86171652 ~ 86291885 (+)
LOC118965088 NA coding upstream 284032 86069288 ~ 86069806 (+)
LOC110526995 LOC106587650 coding downstream 138 86366145 ~ 86383561 (+)
LOC110526916 LOC106587652 coding downstream 23352 86389359 ~ 86412050 (+)
LOC110526739 LOC106562664 coding downstream 68846 86434853 ~ 86439258 (+)
LOC118964957 LOC106587654 coding downstream 87100 86453107 ~ 86480827 (+)
LOC110526773 LOC105014000 coding downstream 147606 86513613 ~ 86526922 (+)
G555344 NA non-coding upstream 9507 86343598 ~ 86344331 (+)
G555334 NA non-coding upstream 32738 86320778 ~ 86321100 (+)
G555327 NA non-coding upstream 44589 86308978 ~ 86309249 (+)
G555324 NA non-coding upstream 57288 86296237 ~ 86296550 (+)
G555192 NA non-coding upstream 59957 86292078 ~ 86293881 (+)
G555399 NA non-coding downstream 59216 86425223 ~ 86425608 (+)
G555400 NA non-coding downstream 59692 86425699 ~ 86425904 (+)
G555407 NA non-coding downstream 88781 86454788 ~ 86455005 (+)
G554907 NA other upstream 539535 85812645 ~ 85814303 (+)
LOC110526726 pax6 other upstream 547694 85781791 ~ 85806164 (+)
G555405 LOC106587654 other downstream 83837 86449844 ~ 86450612 (+)
LOC110526767 LOC106587658 other downstream 175344 86534461 ~ 86544504 (+)
G555456 NA other downstream 203066 86569073 ~ 86570234 (+)
G556150 LOC106562774 other downstream 930511 87296518 ~ 87296986 (+)
LOC110526997 glce other downstream 1672127 88038097 ~ 88121871 (+)

Expression

LOC110526102(LOC106587651) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 200.
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LOC110526102(LOC106587651) Expression in each Bioproject

Bar chart with 21 bars.
LOC110526102(LOC106587651) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6000.
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Co-expression Network