LOC110526741


Basic Information

Item Value
gene id LOC110526741
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 86439615 ~ 86447991 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110526741
TCAATTATATTAAATGTGTGCATTTTTAAAGGGAGTTTAGCTGGCTAAATATGACCACTTTGAGCGCGCTAAAGTTAACTAGCTACGCATCGTCAGGCCCAGCCAAGTAATAGTGGACGACTTTTCCAGAAACTAATAATACTCACCTTAACACATTGAAGGCCTGCCATTGGGTGACAGGAGCTATATAACTATGCCTACTCAGTCGGTTACATTTACACTACGGAGAATAGGCTTTTGATAGCTGGGTTCAGCAGCTGCTCGTCTTCCAACACAGTATCGACGTTTTTGGGGAACTTTTTTTATAACTACGTTTTGATTTCCGCATTTCTACACTTTTTTTGTAACTACGTTTTGACTTCCGCATTTCTACACTTGTTTTACTGTTAGGTGTTGTAGCACCATCTGCTGGAAATTTGGAGGATTGATCACCAGGGAACTCCTGTTATGATCCCAGTTTTGTCTTTATACGGTGCACACAGGCCAGTCGGAGAGCAGTCCAGACCCATCTGCGCTGCACTTCAACACAAATATAGGACCGTCTTTAGGACTACTTGGCGCTTCACGGATGGTGAATTATTCTGCCGAATGTCTATTGAATAGCTATTGTTTTGGTTTGAAGGAAATTCCTTTTTCATTATTTTCTCGTAATGTCTGCCACTGAAGAGAGTCCCATGTTGGTGTCGTATATCGGCTGCTCCAAACGCCAGGCTCCAGGGCCTCTGTGGTGCTCCTGATGCCCCTCACCCACCGCTGAAGATCCCAGGTGGGCGAGGGACTGGCAGGGATCCTCCTCTCCATGTGCTCCTTCACAAAGATGGAAGGCTGACAGTGACCCAGGTGACCTCTGTGCGTGGATCTCTCCCCATCCTGCACTTTCACTACCAGCTGAGCGAGCAACGCAATGCATGCTGGGAGACTATGTTCACCTCAAACAGCCTCTTCCTGGAGATCCCAGAGGGGTCACTCCCTGAGGGCAGcaaagagggACTCACCAGTCTCCTCATGTTCTCGGAAGAAAAGTTAGGAGTCAGCCACGTGTTTCTGTGGTTCTCCAAAAGCAGAGTGGATCAAGCACTTCTTACCAGGACTTTCCACTACATAGGGTTTGAGATTGTGAAACCAGGCCACCCTCTGATACCACCCCGAGCAGACCTTGTGTTTTTGGGCTACTCCATGAGTCCAACATGCCCGGAGTCAGAGGAAGATTGATGTTTGGGTTGATCAGGAGGGGATCACTCATCTTTGCTGACCCAATAGTCTCTTTTCCATGCCTAACTGACCTTTATGTTTTTTTCCTGTGGTGGTGATAGGAAACAAGAAAAGGAATCTATTTAAGCATATTTGGACAAGACccgcctctctcttcctctctgcactTCTCATATGTAGTGCTGTAGTCATGACGGAGAGCAAGCCATTCATTCTGTAGACCTCTTCAGTGATAGAACCTTCAAGGAGATAACCAAAAAGATTGATCCTATTAGGCGGCTGCGTTCTTGACGTCTTGCATGTTGTcgcctgtgtggctcagttggtagagcagggtTGTGTGTTCGATTCCCCCTGAGGAACAGTATGAAAAAATATGCACTCACTACTTTTAAGTCtttttggataaaagcatctgctaaatgactaaactgTAAATGTTGCCACAGCTTCTAGTACAAGTGGGACACTCAGTGCTAAACATATTAACTTAAACTTCACAGTGCAGCTAAAGGTGAGGGACTGTGATAATATAAAACAGTGTACTGGAAGAGGGGGCTAAGGGCAATATGGCACATATTGGAATCTAGACTTCTGGATAATTAAATTACGGGTATGCTTTCAGGACTATTTCTTTGACTGAACAGATGCAACAAATGTATTTTAAAGTGCAAATGCCTCTGTCTTGAATTGAGTGATTGATCCATGTAAACTCCCATTATTGACAGATTTAGCAGAGGTCAGGGGAGCACTTAATACATACTGTGTACTGGACTCACTTTCCACTCTGCTTGTGCATTCAGTTGAGAAGATTAGGCTGCACGTGTGAAAGCAAGAACCTACATTCCCCTGTTGCTGATACAACTTACATTCTATGCACACACTCTTCCTACTTTTTATACTATTGCGTCCTAGAATTTCTATATACATTTTAGATTTCCATGTTCATGCAATGACACTAAAGATGGAATAAAATTCCTGTTATACCT
>TU629594
AACTCCTGTTATGATCCCAGTTTTGTCTTTATACGGTGCACACAGGCCAGTCGGAGAGCAGTCCAGACCCATCTGCGCTGCACTTCAACACAAATATAGGACCGTCTTTAGGACTACTTGGCGCTTCACGGATGGTGAATTATTCTGCCGAATGTCTATTGAATAGCTATTGTTTTGGTTTGAAGGAAATTCCTTTTTCATTATTTTCTCGTAATGTCTGCCACTGAAGAGAGTCCCATGTTGGTGTCGTATATCGGCTGCTCCAAACGCCAGGCTCCAGGGCCTCTGTGGTGCTCCTGATGCCCCTCACCCACCGCTGAAGATCCCAGGTGGGCGAGGGACTGGCAGGGATCCTCCTCTCCATGTGCTCCTTCACAAAGATGGAAGGCTGACAGTGACCCAGGTGACCTCTGTGCGTGGATCTCTCCCCATCCTGCACTTTCACTACCAGCTGAGCGAGCAACGCAATGCATGCTGGGAGACTATGTTCACCTCAAACAGCCTCTTCCTGGAGATCCCAGAGGGGTCACTCCCTGAGGGCAGcaaagagggACTCACCAGTCTCCTCATGTTCTCGGAAGAAAAGTTAGGAGTCAGCCACGTGTTTCTGTGGTTCTCCAAAAGCAGAGTGGATCAAGCACTTCTTACCAGGACTTTCCACTACATAGGGTTTGAGATTGTGAAACCAGGCCACCCTCTGATACCACCCCGAGCAGACCTTGTGTTTTTGGGCTACTCCATGAGTCCAACATGCCCGGAGTCAGAGGAAGATTGATGTTTGGGTTGATCAGGAGGGGATCACTCATCTTTGCTGACCCAATAGTCTCTTTTCCATGCCTAACTGACCTTTATGTTTTTTTCCTGTGGTGGTGATAGGAAACAAGAAAAGGAATCTATTTAAGCATATTTGGACAAGACccgcctctctcttcctctctgcactTCTCATATGTAGTGCTGTAGTCATGACGGAGAGCAAGCCATTCATTCTGTAGACCTCTTCAGTGATAGAACCTTCAAGGAGATAACCAAAAAGATTGATCCTATTAGGCGGCTGCGTTCTTGACGTCTTGCATGTTGTcgcctgtgtggctcagttggtagagcagggtTGTGTGTTCGATTCCCCCTGAGGAACAGTATGAAAAAATATGCACTCACTACTTTTAAGTCtttttggataaaagcatctgctaaatgactaaactgTAAATGTTGCCACAGCTTCTAGTACAAGTGGGACACTCAGTGCTAAACATATTAACTTAAACTTCACAGTGCAGCTAAAGGTGAGGGACTGTGATAATATAAAACAGTGTACTGGAAGAGGGGGCTAAGGGCAATATGGCACATATTGGAATCTAGACTTCTGGATAATTAAATTACGGGTATGCTTTCAGGACTATTTCTTTGACTGAACAGATGCAACAAATGTATTTTAAAGTGCAAATGCCTCTGTCTTGAATTGAGTGATTGATCCATGTAAACTCCCATTATTGACAGATTTAGCAGAGGTCAGGGGAGCACTTAATACATACTGTGTACTGGACTCACTTTCCACTCTGCTTGTGCATTCAGTTGAGAAGATTAGGCTGCACGTGTGAAAGCAAGAACCTACATTCCCCTGTTGCTGATACAACTTACATTCTATGCACACACTCTTCCTACTTTTTATACTATTGCGTCCTAGAATTTCTATATACATTTTAGATTTCCATGTTCATGCAATGACACTAAAGATGGAATAAAATTCCTGT

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110526741 False 2201 mRNA 0.45 5 86439615 86447991
TU629594 True 1757 TUCP 0.45 5 86439622 86447554

Neighbor

gene id symbol gene type direction distance location
LOC110526738 LOC106587653 coding downstream 7555 86427532 ~ 86432060 (-)
LOC118964956 rabp1 coding downstream 15092 86412450 ~ 86424523 (-)
LOC118964954 NA coding downstream 92876 86341898 ~ 86346739 (-)
elp4 elp4 coding downstream 504608 85812100 ~ 85935007 (-)
LOC110506939 LOC106596505 coding downstream 683287 85741675 ~ 85779604 (-)
LOC110526766 LOC106562456 coding upstream 102275 86550266 ~ 86555102 (-)
LOC118965097 NA coding upstream 104573 86552564 ~ 86552691 (-)
LOC110506207 LOC106562785 coding upstream 108832 86556823 ~ 86602398 (-)
LOC110506964 LOC106562409 coding upstream 154676 86602667 ~ 86612241 (-)
LOC110506206 neo1 coding upstream 166799 86614790 ~ 86829756 (-)
G555604 NA non-coding downstream 5167 86434213 ~ 86434448 (-)
G555602 NA non-coding downstream 19717 86419435 ~ 86419898 (-)
G555599 NA non-coding downstream 27578 86409532 ~ 86412037 (-)
G555596 LOC106587652 non-coding downstream 31734 86407410 ~ 86407881 (-)
G555619 NA non-coding upstream 20743 86468734 ~ 86469158 (-)
G555631 NA non-coding upstream 25056 86473047 ~ 86473260 (-)
G555634 LOC106587654 non-coding upstream 27244 86475235 ~ 86478048 (-)
G555636 NA non-coding upstream 34910 86482901 ~ 86483206 (-)
G555637 NA non-coding upstream 36924 86484915 ~ 86485581 (-)
G555606 NA other downstream 1713 86434941 ~ 86437902 (-)
G555590 LOC106587652 other downstream 46555 86392747 ~ 86393060 (-)
LOC118936664 LOC106562605 other downstream 775361 85642286 ~ 85664291 (-)
G554819 NA other downstream 806928 85630576 ~ 85632687 (-)
G555617 NA other upstream 7133 86455124 ~ 86457965 (-)
LOC110506946 LOC106562772 other upstream 1009986 87456447 ~ 87498104 (-)
LOC110513865 LOC106562791 other upstream 1098598 87546236 ~ 87693072 (-)
LOC110526751 LOC106562707 other upstream 1325256 87773201 ~ 87860425 (-)
G557663 NA other upstream 2711233 89159224 ~ 89159885 (-)

Expression


Co-expression Network