LOC110506954 (LOC106562777)


Basic Information

Item Value
gene id LOC110506954
gene name LOC106562777
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 86984564 ~ 87196696 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981793.1
CGTGAGCGCGCACTGTTTAGCAAAGAGAAAAGGCAGCAGAGGTTTCATCGAACGTCACCGGGGATAGGAAGGGCtgcttttaatacattttaagaaCAGAAGAAAATAGGACACATATGCGTCACTGTTCGGGACTGATCTGAATTTTGAATCATTTTCGGGGGAAGTTATTTGGAGAGAAGAACGAAGGCGCAGTTGTTTAAGGAAACCCAGGGAATTAAAAATCAGATTTGAGAGTTGCATTTGTGTGCTAATTCCCCTGTCCCAAACGAGAAGGCTTCCGCGCACAACAGATTTGGATTAACGTTCATTGATGTGGTAAGtGGTGATGTCTTGAGACAATCTCCCATCCGGCCTAGTGAAGGACGTGCGAGGTCAAGTGACTGCTAATGGGAACCCCTGTGACACCATGAGTGCTCGTGATGGCGGCCACGGCGGCGGGATCGGTGGCGTGGGCACGCTGGGCAGGCGAGGACGCTACGAGGACTCTGAGTTCACCCTGCGCATCTATCCGGGCTCCCTGGCCGAGGGCACCATTTACTGCCCCGTCAGCGCCCGCAAAAGCACCACGGCCGCCGAGGCCATCGAGCGCTGCCTGGAGCGCCTGCGTCTGGACCGTGACCGCTGCTACGTGCTAGCCGAGGTCAAGGAATTTGGCGGGGAAGAATGGATCCTGAACCCCAGCGACTGTCCCGTCCAACGGATGATGTTGTGGCCCCGCGGAGCTCTGGAGCAGCGCTCGGGCTCGGGCGGCGGGGAGGACTACCGCTTCCTGCTGCGGCAGAAGAATCTGGATGGCTCCATCCACTACGGCGGCAGCCTGCAGATGTGGCTGCGTGTGACCGAGGAGCGCCGGCGCATGACGGAGCGTGGCCTGTTGCCACAGGAGGAGGTCAGGGGTGACCACGCCGACTTGTGCTGCCTGCCGGAGCTCAACGAGCGCTCGCTGCTGGACAACCTACGCTCGCGCTTCCGCCAGGAGAGGATTTACACCTACGTAGGCAGCATCCTCATCGTCATTAACCCCTTCCAGTTCCTCCCCATCTATAACCCGAAGTACGTCAAGATGTACGACAACCACGCTCTGGGAGACCTGGAGCCGCACATCTACGCCGTGGCGGATGTGGCTTACCACGCCATGCTGCAGCGACGGAGGAACCAGTGCATCGTCATCTCTGGAGAGAGCGGCTCTGGAAAGACCCAGAGCACCAACTTCCTGATTCACCACCTGACTGCCCTCAGCCAGAAGGGGTTCGCCAGCGGGGTGGAGCAGATCATTCTGGGGGCGGGGCCAGTGTTGGAGgcaTTTGGGAATGCAAAAACTGCCCACAACAACAACTCGAGTCGCTTTGGCAAGTTCATCCAAGTGAATTACCAGGAGAGTGGTACTGTCCGAGGAGCCTATGTGGAGAAGTACCTTCTGGAGAAATCAAGACTGGTCTACCAGGAACACAACGAACGGAACTACCATGTGTTTTACTACCTGCTGGCAGGAgcaagtgaggaggagaggagcacctTTCACCTCAAAAAGCCTGAAGAATATCATTACCTCAACCAGATGACAAAGAAAGTCCTGAGACTGCACTGGGAGAATTACTATGAGAGCGAAGCGGACTGCTTCACAGTGGAAGGGGAGGACCTGAAGCATGACTTTGAGAGACTGCAGCTGGCCATGGAGATGGTGGGATTCCTGCCTGCCACGCGCAAACaGATATTTTCTCTGTTGTCGGCCATTCTTCACCTGGGGAACATCCGCTACAAGAAGAAGACCTACCGAGATGACTCCATTGACATCTGCAATCCAGAAGTCCTACCTACTGTCTCAGAACTGTTAGAGGTCAAGGAGGAGATGCTATTTGAAGCCCTGACGACGAGGAAGACCATGACAGTGGGAGAGAGGCTGATCGTGCCCTACAAACTGGCTGAGGCGGGCACGGTGCGAGACTCCATGGCCAAGTCCCTGTACAGCGCACTGTTTGACTGGATTGTGTTCCGGATCAACCACGCACTGCTCAACAACCGGGACTTGGAGGAGAGCGCCAAGATCTTTTCCATCGGAGTGTTGGACATCTTTGGCTTTGAGGACTACGAAAACAACAGCTTTGAGCAGTTCTGCATCAACTTCGCCAACGAGAGGCTCCAACACTACTTCAATCAGCACATCTTTAAGCTTGAGCAGGAGGAGTACAGGGCGGAGGGCATCAGCTGGCACAACATTGACTACATCGACAACACAGGCTGCATCAACCTCATCAGTAAGAAGCCCACTGCGCTGCTCCACCTGCTGGATGAGGAGTCAAACTTCCCCCAGGCCTCTAACCAGACTCTGCTGGACAAGTTCAAGCGGCAGCATGAGGGCAACGGCTACATTGAGTTTCCCGCCGTCATGGAGCCCGCCTTCATCATCCGCCACTACGCCGGCAAGGTCAAATACGGGGTCAAGGACTTCCGGGAGAAGAATACGGACCATATGCGTCCGGACATCGTGGCCCTACTGAAGAGCAGCAAAAACGCCTTCATCTGTGGCCTGATGGGCATCGACCCCCCAGCCACCTTCCGCTGGGCTGTCCTCAGAGCCTTCTTCAGAGCCATGGTGGCCTTCAGGGAGTCTGGGAAGAGACACGTACACAGGAAGACTGGGCATGATGCCGCTGCTCCCTGTGCAGTTTTGTGCAGTGTGGATAGTTTTAGCTTTCTGCATCACCCTGTGCATCAGAGAAGTTTAGAGATCCTGCAGAGGTGCAAAGAGGAGAAGTACAGTGTGGTCAGAAAGAGTCTACGAACACCGCTATCGGACCTGCAGGGCAGCAACACGCTCAACGAGAAATCTCCACGGGATGGTGTGGGCTGGAATGGGCGTGGTGGGCGTCAGAGCCGCCTGTCATCCAGCGGGTCCAACACGGAAGAGGACGGAGGAATTTTTGTCAACTCCACCAGCAGCAAGCTCCTGGAGAGAGCCCACGGCATCCTCATGAGAAACAAAAACTACAAATCAAAGCCCAGTCTTCCAAAGCACTTGCTTGACGTCAAGTCCCTAAAGTATCTCAGCAACCTGACGCTGCACGACCGCATCACCAagtccctcctccacctccacaagAAGAAGAAACCACCCAGCATCAGCGCTCAGTTCCAGGCCTCTCTCAATAAGCTGATGGAGACTCTGGGCCAATCAGAGCCCTACTTTGTCAAATGCATCCGTTCTAATGCAGAGAAGCTGCCCCTGCGCTTCAACGAGGGCCTGGTGCTCAGGCAGCTCCGCTACACGGGTATGCTGGAGACCGTGCGCATCCGCCAGTCAGGCTACAGCATCAAGTACACCTTCCAGGATTTCATCCGCCACTTCCACGTGCTGCTACCCGAGGGCACCAGTGCCACCCAGGAAGGCATCGGACAGTATCTGGGCCAGGTGGACCTTGCTCCCGATGGATACCAAGTTGGcaaaaccatgGTGTTCCTGCGGGAGGTGGAGCGTCAGCGACTGCAGGCGTTGCTTCACAGGGAGGTCCTGAACCGTATCGTCACTCTGCAGCGCCGCTTCAGGGCCCTGCTGGAGAGGAAACACTTCACCAGGATGAGACTGGCTGCCACAACTATCCAGAAATGGTGGCGTGCCTACCAGTCCAAGCAGGAGGATGACTACGACCCAAGCATCCAGGAGGGGGCAGCCTTGTGCATCCAGACAGCTTGGCGGGGGTACAAGGAGCGCTGGAGGTTCGGGCTGTGGCGGGAGGCGGCTCTGCTGCTGCAGAGGGAGTGGAGGGCGTTGCTGAAGCGGCGAGAACGGGAGGGGGCGGCACTCGCCATCCAGACAGCCTGGCGCTGCCACATGGCCAGAGAGGCCTTCCTGCGACTGCGTGGCACCATGACGCTGCTACAGGCAGTGGGCAAAGGCTACCTGGCCAGACAGAGCTTCGGGCATTTGAAGGAGcagagactgagggagaaagagcagaggctgagggagagagagagtcaacaacagcagcagcagctgctgCAGAATGGACAGACGCGCCTCTCGCCAGAAGAAGACGATCTGCCAGTGAGGATCATGGGCCTGGACCTGAGCACATGGGAGGACCGCTCATACAAGGAGCGGGAAAGGAGCCTCCAGAGACTGAACAGCCAGGAGGAGAGGGTAAAAGAGGGACGAGGTGTAGAAATaggaggtgagggaggagtggcGAGGGCCGCAGAGAGCTCAGGTAGGGCCCAGTCGGAACCACCGCCAGTTTCGTCGACAGCCGCtgtggtggtgagagagaggaccAGGACCCTGGACGAGCCCTGCCAGAGGACCACCAGGGCCAAGAGGGAGAGCCGGAGGATGAGGGAGCTGGAGCAGGCCAAGTTCAGCCTGGAGCTGCTCAAGGTGCGGGCCACAGGCAGTGGTGGGGCCTCGTCCCCCTCTGAAGAGAGGCGCTGGTCGGCCGAGCtggcccccaccaccacccctcctcgcCGCTCCCCCCAGGGACCCGGAACCCCCGACAGCCAGAGCTCCAAGGGCAGCTTCGAGCTACTCAGCATGGATGACGAGATACTCAGGGAGAGTGCACCTTTGGCGGATGAGGAGGAGCTTGgttcccccctctcttctgaAGTGCAGCTGGAGCAGGCCCCGGAGGTCAGCCTCGTGTCGAAGGAGCCTCCCAGGGCTTCTGTGTCCGATGACGCCTCCCCACCTCCAAACAGTCAGAGTCAGGCCAAGCTAGAACCAGCTGCCGCCTCTCCACCTCCGCCCAAGATAGAGAACTACCTCCCTACCTTTTACGTCCCGTCAACTGATGGCAGCTTGGTCATCACCCATCGTCTTGGCGATGACTCTTCGCGACCCCTCGAGGCCGATACCACTAGTACCACCATCGTCACCAAGCAGCTCAAGTCAATCAAACAAAGGCGGGAATTGTCACGGCGACCTGTGGTTGTGGTCATCAGCATGCAGAAGGAAACCCCCCTGGATCAGGAGGAGCTTGGTGGTGCCGTCGTTCGTCTTCCCCGTGTAGAGGTTCGTGACGGGTCGGCACAAACCGGCGAATCCCCTTCATCGCCACGGCTACCAGTCCCTGCACCCGTTCCACCACTAGATCCCGCCCCAGTCATCCCCATCTCTGGCCCCACCCCTGTCCCGGCTGCCAACCAGTTGGTCCTGGAGAAGCTGGAACGACTGAacgaggaaaaggaggagaggcaGCGGCACCTGCAGCAGCAGAACGAGCGTGAGATGATGGACCAGATCCGGAAGCAGAAGGAGGTTCTGGAGAGACAGCGGCACCACTTCGCCCAGCACGAGAGGGAACTGTTGGAGAAGCAGAGGGGTGAGGCCCTGGTCAGGATCCAGCAGAGCCGGCAGGGAAGGCCCCCCCAAGACAGGAGTGCAACCGCAGCTACATCTACCAGGCCCCTTAGACCCAGCTCCCTTCTCATCGAGAGAGCCCCGGCTCTGGCTCCACCCTCCAGGACCCAGTCTGTGTCCGCTGCCCACGCATACCTCTCTCCTCCTGGGCCGATGGACACCCAGAGTGTCCCCATGCCCCATCCTGAGCCCAACAAGGCCCAGCCCAACAAGGCCCAGCCCAACCAGGCCCggctccctccacctccctcagcCCCCaaaacaaagaccagggatgggAGACCCATTGCGGATGGCTGGGCGCCAAATTTGACCCTGGAGTCCAGAGAGGGCGGGGGAGGAGGAGCCAGAGGGAGGGTTCCCAAGAAGGCCCCAGCTAATCAGGGCACCAGCATCAGCATGACTGACATGTCGGAAAACATCTTCTTTGCGCCCAAAGACAGAGTGGCGTTCTCTAAGTTTGACCAGGAGAAGCCTGTCAATCAAGAGAAGCCTGTAGCAGTCCCAAAAGAGGGCCCCTCCTCAAGCACCAAGCCCACCATAGGACTGAGAACACAGGAGGTCAGCAGGGCGGGCCACAGAAAGAAAGCCCGCATGGCTCGGACACGCTCTGACTTTCTGACCCGCACGCCGACCTCCTCGCTGGGGGGCGAGTCGGAGGAGGACGAGTACGACGGaaagccccccctctcctcccctcccccctactCCCCAACCATCCCTAAACAGGATTCCTTTGAGTGTTTCAGTGACTCAGAGATGCCTTCCACCAGCTCTGAGGAACAGAAGAAGATACATAAGGCCATGTCATCTGGAGATCTGGCCAAAGTTGACACGATACGCAAGAACGCCCAGTCAGATGGAAGGGTTCGTGGTAAGATGCGTTTCTGGGGCAAGACGAAGCAGGGTGAGAAGAAGTCGTCCAGAGAGAAGCTGTTCTGTGGAGGTGACTCCATGGATGCAGATGACGGAGACACGGGGCCACTGCTaggagaagcAGGACAGGATTACATGTCACCGCCTCGTAGTCCAGACCTGACCCTGGAGCGGGGGGCCAAGGAGTTCAAGGAGAACAAGGAGCCCTCGCCAAAAGTGAAGAGGCGGCGTAGCGTCAAGATTAGCAGTGTTGCCCTAGAGCCTGCCCAGTGGGGGAACGATGCACTGCAGATCCTCACCTGCACCAACGACTACAGGAGCATGAACGACTTCCTCATGaagaagATCGGTGACCTGGTGGCTGAGGACGGCGGTAAGAAAGACACAATGGTGGACGTGGTGTTTAAAAAGGCCTTGAAGGAGTTCCGCCTCAATATCTTCAACTCCTACTCTACAGCTCTAGCGATGGATGATGGGAAGAGTATCCGCTATAAGGACCTATACGCCCTGTTCGAGCAGATCCTGGAGAAGACCATGCGCCTAGAGCAGAGGGACTGGAGCGAGTCGCCCGTCAAGGTCTGGGTCAACACCTTCAAGATCTTTCTGGATGAGTTCATGACCGAGTACAAGCCCATGGACAGCACCATCAGCAAGGTCCCCAAAACCGAgcgaaagaagaggaggaaaaaggATGCTGACATTGTGGAGGAACACAATGGCCACATCTTCAAGGCCACCCAGTACAGTATCCCCACCTACTGCGAGTACTGCTCCTCTCTCATCTGGATGATGGACAGGGCCTGCGTCTGCAAATTGTGTCGCTACGCCTGCCACAGAAAGTGCTGCCTGAAGTTGACCACCAAATGCAGCAAAAAGtacGACCCAGAGCTGTCGTCCAGGCAGTTTGGGGTGGAGGTGTCCCGTCTGACCAACGAGGAGAGGACAGTGCCCCTGGTTGTGGAGAAGCTCATCAACTACATTGAGATGCACGGCCTCTACACCGAGGGCATCTACAGGAAGTCTGGCTCCACCAATAAGATCAAAGAGCTCAAGCAGGGACTGGACACAGACGTGAACAACATGAACCTGGATGACTACAACATCCACGTTATCGCTAGTGTCTTCAAGCAGTGGCTCCGGGACTTACCCAATCCGCTTATGACCTTTGAACTATACGAGGAGTTCCTCCGCGCCATGTGCCTGCAGGACAAGAAGGAGGTGATTCGAGGGGTCTACTCTATTATCGACCAGCTCAGTAGAACTCACCTCAACACTCTGGAACGGCTCTTCTTCCACCTAGTTAGGATCGCAGGGCAGGAGGACACCAACCGTATGTCGGCCAACGCCATAGCCATTGTCTTCGCCCCCTGCATCCTCCGCTGCCCCGACACCATCGACCCCCTGCAGAGTGTCCAGGACATCGGCAAGACCACAGCGTGTGTGGAGCTCATCATCGGAGAGCAGATGAATAAGTACTGCGCCCGGCTAAAGGACATCAACAGTCTGGAGTTTGCAGAGAACAAAGCCAAGTGCAGATTGACCCTCATTCGGAGATCAATGAAACCTGTACTAATTGCTGTTAGATTTATGACCATATCCCGCAGTACTGTCCCGGGCAAGGGCCACGTACGGCGGTTCAGCTACCACACGCCCTCGCCCCCGGTTAGCCCACGCCTGCCGTCCGTGACGGGTGCAGTGGTGCAGGAGAGCGGCGGTGAGGAGGTGGGGGCGGGGCAGGAGCCTGAGGTATCGGAGCACCAGCAGTTGGCCATGCAGCAGGAGGAGAGGGTGCTGACGGAGCAGATCGAGAGCCTGCAGAAAGAGAAGGAGGAGCTAACCTTTGAGATGCTGACTTTGGAGCAGCGAGCATCAGACGATGAGACCCTGGAGTCGGAGGCGTCCATCGGCACGGCCGACAGCTCTGAGAACCTCAACGTGGACTCTGAAGGAGCCACCTCCGACTTCTCCGGTCCCTCAGAGAGAGAACCCACGCTGGCCCCCGTCGCCCGAACCAAGAGGTCGGAGGGGAAGAGCCACCGACGCCGCAACCTACGCAGGCAACCAGACTCCCAGGACTCAGTGGACTCCTGTtctaccatctcctccctctcttcctcctcccactTCCAcccgtcctcttcctcctctgtggCCACAGCTCGCCACTTTCGCTACCGCTCAAAGTCGCCCtcttctggctctggctctgcccAGGGCTTGTACCTGCCCCAGCCTCCCCGCCGCGACAGCATGGACTGTCCCCCCCCGGCCAAACAGGAGGGGGCGTTTGAAGAGAGGTCACAGTTCACCAGCCGAGGCACCTTCAACCCGGAAAAGGGCAAACAGAAACTGAAAGGATCCAAGAACTCACCCTTGAGGCACTCCCATGACAGTGGGGGCCGCAGCAGGGATCCGCCTGACTTACCCCAGCAGCGGGTTTTGTACGGCAGCAATGAGTTCATGGTATGAAGGACAGTGGGAAAACGTCCATCACAGCCCACTCTCCCTAAGAGCATGCGATCTGACCCCCTTCCTCAAACACTCCAGCTCACCCTTTCTCAGTCCACATCCGCAACGATGCAGAACTGTCCCCCCAAGTGCCATGTACACACTGTGTGTCCACctcagagacaggagagggacaggctgggagtgggagaggaggaaccAGTAGAAAGTTGATCTCCTTAACTGCCAACCACACTCCCCATGGTCCCTCTGCAGGTCTGGGCCTCCCTCAGCCCAGGGGAGAGGGGACGTGTGGAGCAGGAAGGCAGAGAAAAGGGAATGCtgggacactgggagaggactACTCAGCATCCGGGAGATCTCCCGAGCTGACGTCCCAATGCAAACTAGGAGGTGGAACGAGGCTAGAAGatgggaagaaaaaaaagaattAAAAACCTACCGAGCCATTGACAGTGCTGCCGTGTCCATGAACTTGAGATCTCAATCATTGGCTGCTTTAAAGTTTACAGTTAAAAACAATCAATGTAAGCAGTGGTTCCTCTATTATTACAAATGTATTTTTCCCTTAAgcctatttaatacatttttaatttcatGGAAAGTATAAATCTATATAACTATATTATAAAGGTATAAATACTGTACAAAGCCGGAACACCAGTAACTGCTGGGTAGTTGAAGTCAAATATTTATCTTTTTCTTGAGTATCTTGGGCAGAGATGTATGGTATTGGACAAAggctgtgtacgtgtgtgtgtttgagtgttaatgtgtgtgtgtgtgtgtgtgagaagaccACTTCATGTGTTTTTATGTTTGTGCTGCTTCGTTCCTCTCCTGAGGGAAATACGGCCATGAAAGGGACCAAGTTAGCTGGTGTGTATTCTAGCCAAGGGGATCCCAGCTCTGTAAAGAATGTCGGATGTGTATAAAATCACTGCATTCACAGCTTAACAGCCATACAACAATTAGAATGTACAGTACAATATGTATTGGACAAATAGCATTCTCCTTGCTCTGGATACATGTTACCCCCAAATCCTTGTCTTCCTGAGATATCAGTGTTGGACTCAATAGCAACCAAACAAGGACATGCA

Function

NR:

description
PREDICTED: unconventional myosin-IXa-like

GO: NA

KEGG:

id description
K10360 MYO9; myosin IX

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981793.1 True 9807 mRNA 0.56 43 86984564 87196696

Neighbor

gene id symbol gene type direction distance location
LOC110506960 LOC106562779 coding downstream 3308 86971824 ~ 86981256 (-)
LOC110506961 NA coding downstream 18939 86947442 ~ 86965625 (-)
LOC110506962 LOC106562712 coding downstream 19237 86963073 ~ 86965327 (-)
LOC110506206 neo1 coding downstream 154808 86614790 ~ 86829756 (-)
LOC110506964 LOC106562409 coding downstream 372323 86602667 ~ 86612241 (-)
LOC110514547 LOC106562775 coding upstream 27987 87224653 ~ 87258522 (-)
LOC110506202 LOC106562774 coding upstream 66901 87262460 ~ 87359594 (-)
LOC110512518 trip4 coding upstream 169656 87366352 ~ 87453975 (-)
LOC110506946 LOC106562772 coding upstream 259751 87456447 ~ 87498104 (-)
LOC118964959 NA coding upstream 319601 87516297 ~ 87520121 (-)
G555999 NA non-coding downstream 38463 86945443 ~ 86946101 (-)
G555998 NA non-coding downstream 43248 86940975 ~ 86941316 (-)
G555829 NA non-coding downstream 44280 86939956 ~ 86940284 (-)
G555808 NA non-coding downstream 98335 86886028 ~ 86886229 (-)
G556120 NA non-coding upstream 14326 87211022 ~ 87221536 (-)
G556196 NA non-coding upstream 62683 87259379 ~ 87260368 (-)
G556198 NA non-coding upstream 64601 87261297 ~ 87261596 (-)
G555617 NA other downstream 526599 86455124 ~ 86457965 (-)
LOC110526741 NA other downstream 537010 86439615 ~ 86447991 (-)
G555606 NA other downstream 546662 86434941 ~ 86437902 (-)
G555590 LOC106587652 other downstream 591504 86392747 ~ 86393060 (-)
LOC110506939 LOC106596505 other downstream 1228215 85741675 ~ 85779604 (-)
LOC110513865 LOC106562791 other upstream 349893 87546236 ~ 87693072 (-)
LOC110526751 LOC106562707 other upstream 576551 87773201 ~ 87860425 (-)
G557663 NA other upstream 1962528 89159224 ~ 89159885 (-)
G558051 NA other upstream 2424652 89621348 ~ 89621755 (-)

Expression


Co-expression Network