Item | Value |
---|---|
gene id | LOC110514547 |
gene name | LOC106562775 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 87224653 ~ 87258522 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
uncharacterized protein LOC110514547 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036981376.1 | False | 2542 | mRNA | 0.44 | 12 | 87224683 | 87254815 |
XM_036981377.1 | False | 2525 | mRNA | 0.44 | 12 | 87224683 | 87257077 |
XM_036981375.1 | False | 2524 | mRNA | 0.46 | 12 | 87224683 | 87258522 |
XM_036981378.1 | False | 1466 | mRNA | 0.54 | 12 | 87225851 | 87258521 |
TU630063 | False | 3289 | lncRNA | 0.42 | 6 | 87224653 | 87230924 |
TU630072 | True | 3531 | lncRNA | 0.42 | 5 | 87224653 | 87230924 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110506954 | LOC106562777 | coding | downstream | 27987 | 86984564 ~ 87196696 (-) |
LOC110506960 | LOC106562779 | coding | downstream | 243427 | 86971824 ~ 86981256 (-) |
LOC110506961 | NA | coding | downstream | 259058 | 86947442 ~ 86965625 (-) |
LOC110506962 | LOC106562712 | coding | downstream | 259356 | 86963073 ~ 86965327 (-) |
LOC110506206 | neo1 | coding | downstream | 394927 | 86614790 ~ 86829756 (-) |
LOC110506202 | LOC106562774 | coding | upstream | 5075 | 87262460 ~ 87359594 (-) |
LOC110512518 | trip4 | coding | upstream | 107830 | 87366352 ~ 87453975 (-) |
LOC110506946 | LOC106562772 | coding | upstream | 197925 | 87456447 ~ 87498104 (-) |
LOC118964959 | NA | coding | upstream | 257775 | 87516297 ~ 87520121 (-) |
LOC110513865 | LOC106562791 | coding | upstream | 287714 | 87546236 ~ 87693072 (-) |
G556120 | NA | non-coding | downstream | 3147 | 87211022 ~ 87221536 (-) |
G556083 | NA | non-coding | downstream | 74557 | 87149891 ~ 87150126 (-) |
G556074 | NA | non-coding | downstream | 86784 | 87136850 ~ 87137899 (-) |
G556072 | NA | non-coding | downstream | 93625 | 87129556 ~ 87131058 (-) |
G556067 | NA | non-coding | downstream | 101605 | 87121006 ~ 87123078 (-) |
G556196 | NA | non-coding | upstream | 857 | 87259379 ~ 87260368 (-) |
G556198 | NA | non-coding | upstream | 2775 | 87261297 ~ 87261596 (-) |
G556199 | NA | non-coding | upstream | 5820 | 87264342 ~ 87264732 (-) |
G556200 | NA | non-coding | upstream | 6658 | 87265180 ~ 87265598 (-) |
G555617 | NA | other | downstream | 766718 | 86455124 ~ 86457965 (-) |
LOC110526741 | NA | other | downstream | 777129 | 86439615 ~ 86447991 (-) |
G555606 | NA | other | downstream | 786781 | 86434941 ~ 86437902 (-) |
G555590 | LOC106587652 | other | downstream | 831623 | 86392747 ~ 86393060 (-) |
LOC110506939 | LOC106596505 | other | downstream | 1468334 | 85741675 ~ 85779604 (-) |
LOC110526751 | LOC106562707 | other | upstream | 514725 | 87773201 ~ 87860425 (-) |
G557663 | NA | other | upstream | 1900702 | 89159224 ~ 89159885 (-) |
G558051 | NA | other | upstream | 2362826 | 89621348 ~ 89621755 (-) |