Gene
RNA
| Item | Value |
|---|---|
| gene id | st3gal-i |
| gene name | st3gal-i |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 87749056 ~ 87759565 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0006486 | protein glycosylation | biological_process |
| GO:0097503 | sialylation | biological_process |
| GO:0030173 | integral component of Golgi membrane | cellular_component |
| GO:0003836 | beta-galactoside (CMP) alpha-2,3-sialyltransferase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001124401.1 | False | 1171 | mRNA | 0.45 | 6 | 87749056 | 87759565 |
| XM_036979107.1 | True | 940 | mRNA | 0.45 | 6 | 87752106 | 87759565 |
87,740,000
87,742,000
87,744,000
87,746,000
87,748,000
87,750,000
87,752,000
87,754,000
87,756,000
87,758,000
87,760,000
87,762,000
87,764,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526759 | LOC106562792 | coding | upstream | 51475 | 87694999 ~ 87697581 (+) |
| LOC118964958 | senp8 | coding | upstream | 549956 | 87196781 ~ 87199100 (+) |
| LOC110526767 | LOC106587658 | coding | upstream | 1204552 | 86534461 ~ 86544504 (+) |
| LOC110526773 | LOC105014000 | coding | upstream | 1222134 | 86513613 ~ 86526922 (+) |
| LOC118964957 | LOC106587654 | coding | upstream | 1268229 | 86453107 ~ 86480827 (+) |
| LOC118964960 | NA | coding | downstream | 4 | 87759569 ~ 87764850 (+) |
| LOC110526745 | LOC106562700 | coding | downstream | 137916 | 87897481 ~ 87996337 (+) |
| LOC118964961 | NA | coding | downstream | 221766 | 87981331 ~ 87986876 (+) |
| LOC110526997 | glce | coding | downstream | 278532 | 88038097 ~ 88121871 (+) |
| LOC110526779 | LOC106595196 | coding | downstream | 377050 | 88136615 ~ 88148567 (+) |
| G556552 | NA | non-coding | upstream | 25857 | 87722745 ~ 87723199 (+) |
| G556536 | NA | non-coding | upstream | 44980 | 87702281 ~ 87704076 (+) |
| G556528 | NA | non-coding | upstream | 55412 | 87693374 ~ 87693644 (+) |
| G556329 | LOC106562772 | non-coding | upstream | 291154 | 87456510 ~ 87457902 (+) |
| G556276 | NA | non-coding | upstream | 329391 | 87419454 ~ 87419665 (+) |
| G556564 | NA | non-coding | downstream | 1896 | 87761461 ~ 87762158 (+) |
| G556573 | NA | non-coding | downstream | 11708 | 87771273 ~ 87773332 (+) |
| G556586 | NA | non-coding | downstream | 34914 | 87794479 ~ 87794790 (+) |
| G556629 | NA | non-coding | downstream | 118284 | 87877849 ~ 87878485 (+) |
| G556150 | LOC106562774 | other | upstream | 452070 | 87296518 ~ 87296986 (+) |
| G555456 | NA | other | upstream | 1178822 | 86569073 ~ 86570234 (+) |
| G555405 | LOC106587654 | other | upstream | 1298444 | 86449844 ~ 86450612 (+) |
| LOC118964955 | LOC106592958 | other | upstream | 1397172 | 86350925 ~ 86353193 (+) |
| LOC110526780 | LOC106562699 | other | downstream | 389517 | 88149054 ~ 88168508 (+) |
| G557241 | NA | other | downstream | 820764 | 88580329 ~ 88584055 (+) |
| G557324 | NA | other | downstream | 986738 | 88746303 ~ 88747223 (+) |
| G557562 | NA | other | downstream | 1275245 | 89034810 ~ 89035260 (+) |
