LOC118964965 (LOC106562863)


Basic Information

Item Value
gene id LOC118964965
gene name LOC106562863
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 90417861 ~ 90424832 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052280.1
GCCTTTAAATAGCCTACCGCTCACAAAATGTCAGTGATCGCATCGGAAGTTAGAGGTAACATCCATTTTCTATTTCTTCAATCTGGACATATTGCAGGACGTCATGACGAACGTTCCGACGCCAACTGGTTTGGAGAGCGCGGTGGCACAGAGAGGAACTCTTCCCCGTCGCCATTCAAGCGTTTGTCGGAACTTATTTGGACCCGTCGACCATTATGCGCTGAACCGCGAGTTGAAGGCGAAGCTGAAGGAAATATCTGAACGAGACCAGCGTCGATGGAATTTCCACTTCGAGACAGACGCACCAATTCCCGGGATTTATGAATGGGAAGGAATGTCAGCGGAGTCGATGCCAGCCTTCTACCAGGTGTCGGAAGTTGGAGCACGCAGATTTGTTCCCGAGGAGAAGATCGATGTCTGAGATGACTAGCCCCCAGCACAATTCTTCTCTCAATTCCCCTTGAAGAAACGAGGGAACCTTTCGATTAACCACGCTGACAAATGCTACCATCTGCCGCTTCTGCAGTTCATATTTTCTATCTCGGGCCAAAAAAAGATGGAGTAACCCTCCCAAATAAGCAACATGTGtttatgtatttaaaaaaaaaaagaataattcaATTAACTTGTGTTAATTTATTACGTGTCTGATTGTTTGAAATGGCATCTGTGAAAGACAAACAATTTTGTTGACTTTCTGCTCACTTTATTGCATTAGTGAGCCCTCAAATGATACTTAAGCTTAATTTGCTACATAGGTTATCTGCCTTTTTGCAATTGTTTTCCATTGGACAAAAGATGTAACCCACAAATGTTGGCTTAGGTTTTTTTGCCAAAGTAACaatgtttttaaattattttatttgatttcaacTAATTTATGTTTTAATTCAATTAAGTTTTCGATTGTTTAAATGGTAGCTGGGGAAACTATTAAAACAATGTAGTTTACA
>TU633298
CACTAGGATGGCGGCACGAAAAAAATAAATGCTCTATAGATTCTAAATCAGAGGAACATAAAACAAGGCATTTTGTCAAAATGGAATCTTTTGGGCAAGAAATCATTAACGGGATAAATGGAAGAACGTATTTTAAAATGAGTTTCTTTAACTTTTGGGATAACCGGACAATTAAGGTAAAAGATAGTCGCTTTTGACCATAGCATGAGGGTTGGTCACTTCCATACCAATATATTTAATTATAATCACCAAAAATGACTTCATTAACTGCCAATCATATCCACttattgttgcattttttttatccaaaagATTCAAGTCATTATTTGTAGACTTGGAAAACAGGGAACAACCTCAAATAGCAAAGTGTTCATAATAAGTCCAAGTAAAGAACGTGGAATTGCTTTGCAAACCTTCATATATTCTCTCTGAGCAATATTAACCTGAAATTGCCCAATTAACTGATCAAACGGCAAAAACTCCTAATTAGACTACAATCACGCCATTTAAAAGGTGAAAGGGGCGTGTTTTCACTCAAACGGATAACCAATAATCAAGACCGGACAATAATATAGTCGGCATCCTCGGGCCTTTAAATAGCCTACCGCTCACAAAATGTCAGTGATCGCATCGGAAGTTAGAGGTAACATCCATTTTCTATTTCTTCAATCTGGACATATTGCAGGACGTCATGACGAACGTTCCGACGCCAACTGGTTTGGAGAGCGCGGTGGCACAGAGAGGAACTCTTCCCCGTCGCCATTCAAGCGTTTGTCGGAACTTATTTGGACCCGTCGACCATTATGCGCTGAACCGCGAGTTGAAGGCGAAGCTGAAGGAAATATCTGAACGAGACCAGCGTCGATGGAATTTCCACTTCGAGACAGACGCACCAATTCCCGGGATTTATGAATGGGAAGGAATGTCAGCGGAGTCGATGCCAGCCTTCTACCAGGTGTCGGAAGTTGGAGCACGCAGATTTGTTCCCGAGGAGAAGATCGATGTCTGAGATGACTAGCCCCCAGCACAATTCTTCTCTCAATTCCCCTTGAAGAAACGAGGGAACCTTTCGATTAACCACGCTGACAAATGCTACCATCTGCCGCTTCTGCAGTTCATATTTTCTATCTCGGGCCAAAAAAAGATGGAGTAACCCTCCCAAATAAGCAACATGTGtttatgtatttaaaaaaaaaaagaataattcaATTAACTTGTGTTAATTTATTACGTGTCTGATTGTTTGAAATGGCATCTGTGAAAGACAAACAATTTTGTTGACTTTCTGCTCACTTTATTGCATTAGTGAGCCCTCAAATGATACTTAAGCTTAATTTGCTACATAGGTTATCTGCCTTTTTGCAATTGTTTTCCATTGGACAAAAGATGTAACCCACAAATGTTGGCTTAGGTTTTTTTGCCAAAGTAACaatgtttttaaattattttatttgatttcaacTAATTTATGTTTTAATTCAATTAAGTTTTCGATTGTTTAAATGGTAGCTGGGGAAACTATTAAAACAATGTAGTTTACATTTTGACTTTCTGCTCATTTTATTGTATTAGTGAGCCCTCAAATGGCTAACGAGATGAGAAACGAGAATTTACTGCTCATTATTCCGCACGAAGATGCAGATGCTATTACCCTCGCTGTCGATATGCAAATCAACTCATCCATTCTACAGCATGTAAGCATATTTC

Function

NR:

description
cyclin-dependent kinase inhibitor 1B-like

GO:

id name namespace
GO:0043086 negative regulation of catalytic activity biological_process
GO:0045859 regulation of protein kinase activity biological_process
GO:0042326 negative regulation of phosphorylation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052280.1 False 953 mRNA 0.41 2 90418449 90424666
TU633298 True 1707 TUCP 0.39 2 90417861 90424832

Neighbor

gene id symbol gene type direction distance location
LOC110506983 traf6 coding upstream 65101 90345783 ~ 90354922 (+)
LOC110506986 LOC106592686 coding upstream 72806 90331557 ~ 90345643 (+)
LOC118964964 LOC106562578 coding upstream 89125 90324347 ~ 90329324 (+)
LOC118964963 LOC106593359 coding upstream 332485 90046157 ~ 90085964 (+)
LOC118936341 apip coding upstream 436771 89973608 ~ 89981678 (+)
LOC110506992 LOC106562470 coding downstream 16840 90441506 ~ 90442666 (+)
LOC110526798 cars coding downstream 250849 90675515 ~ 90698529 (+)
LOC110527007 pex16 coding downstream 289959 90714625 ~ 90727022 (+)
LOC110506219 LOC106562554 coding downstream 334826 90759492 ~ 90780813 (+)
LOC110506998 LOC106562604 coding downstream 373354 90798020 ~ 90815693 (+)
G558611 NA non-coding upstream 9257 90408977 ~ 90409192 (+)
G558610 NA non-coding upstream 10164 90408071 ~ 90408285 (+)
G558595 NA non-coding upstream 40268 90377781 ~ 90378181 (+)
G558567 NA non-coding upstream 58265 90359421 ~ 90360184 (+)
G558565 NA non-coding upstream 59916 90358015 ~ 90358533 (+)
G558624 LOC106562471 non-coding downstream 21436 90446102 ~ 90447856 (+)
G558636 NA non-coding downstream 46872 90471538 ~ 90472081 (+)
G558656 NA non-coding downstream 100778 90525444 ~ 90529249 (+)
G558665 NA non-coding downstream 111461 90536127 ~ 90536628 (+)
G558666 NA non-coding downstream 112155 90536821 ~ 90537115 (+)
G558568 NA other upstream 113982 90301409 ~ 90304467 (+)
G558538 NA other upstream 158281 90259612 ~ 90260168 (+)
G558474 NA other upstream 292594 90125189 ~ 90125855 (+)
G557654 NA other upstream 1276893 89141229 ~ 89141556 (+)
LOC110526809 LOC106562822 other downstream 413555 90838122 ~ 90932867 (+)
G559027 NA other downstream 512251 90936917 ~ 90938074 (+)
G559047 NA other downstream 566120 90990786 ~ 90992088 (+)

Expression


Co-expression Network