Item | Value |
---|---|
gene id | LOC110526813 |
gene name | LOC106587896 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 91239934 ~ 91242169 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50, partial |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036981514.1 | True | 688 | mRNA | 0.56 | 3 | 91239934 | 91242169 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110526812 | LOC106587736 | coding | upstream | 43577 | 91170169 ~ 91196357 (+) |
LOC110518689 | leo1 | coding | upstream | 176155 | 91042534 ~ 91063779 (+) |
LOC118964968 | tmod3 | coding | upstream | 216506 | 90980724 ~ 91023428 (+) |
LOC110526809 | LOC106562822 | coding | upstream | 307067 | 90838122 ~ 90932867 (+) |
LOC118964967 | NA | coding | upstream | 336685 | 90902033 ~ 90903249 (+) |
LOC110514654 | LOC106587893 | coding | downstream | 51490 | 91293659 ~ 91343222 (+) |
LOC110509505 | gatm | coding | downstream | 194033 | 91436202 ~ 91456724 (+) |
LOC110511547 | pde8a | coding | downstream | 248340 | 91490509 ~ 91699286 (+) |
LOC110518175 | LOC106562797 | coding | downstream | 463265 | 91705434 ~ 91720120 (+) |
LOC110517107 | LOC106587912 | coding | downstream | 521897 | 91764066 ~ 91789867 (+) |
G559249 | NA | non-coding | upstream | 18198 | 91221209 ~ 91221736 (+) |
G559245 | NA | non-coding | upstream | 34611 | 91205040 ~ 91205323 (+) |
G559244 | NA | non-coding | upstream | 36102 | 91203611 ~ 91203832 (+) |
G559243 | NA | non-coding | upstream | 36415 | 91202861 ~ 91203519 (+) |
G559236 | NA | non-coding | upstream | 73796 | 91165824 ~ 91166138 (+) |
G559257 | NA | non-coding | downstream | 4294 | 91246463 ~ 91252270 (+) |
G559264 | NA | non-coding | downstream | 26852 | 91269021 ~ 91269466 (+) |
G559269 | NA | non-coding | downstream | 35750 | 91277919 ~ 91278154 (+) |
G559273 | NA | non-coding | downstream | 41239 | 91283408 ~ 91284250 (+) |
G559279 | NA | non-coding | downstream | 52599 | 91294768 ~ 91295033 (+) |
G559047 | NA | other | upstream | 248424 | 90990786 ~ 90992088 (+) |
G559027 | NA | other | upstream | 301860 | 90936917 ~ 90938074 (+) |
LOC110527007 | pex16 | other | upstream | 519696 | 90714625 ~ 90727022 (+) |
LOC118964972 | NA | other | downstream | 727998 | 91970091 ~ 91973388 (+) |
LOC110526817 | tipin | other | downstream | 805994 | 92048098 ~ 92066565 (+) |
G560039 | NA | other | downstream | 1061359 | 92303528 ~ 92304637 (+) |