LOC110526813 (LOC106587896)



Basic Information


Item Value
gene id LOC110526813
gene name LOC106587896
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 91239934 ~ 91242169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036981514.1
CCAGCAGAGTACGTTGACGTGTGGAGATCAGAAGTTGTGTCCAGAGTGTGGAGTGAAGAGAGACACAGCTGTCCTCACCAGCATGGCCAAACCACCTGAGATACTGGTGCTGCACCTCAAACGTTTTGGTTGCCATGGGAGTGAGAAGAGGAAGTTGAGGACCAATGTGTTGTTCTCATTGGACAGTTTAGACCTAACCCCCTACCTGTCCAGACCCTCAGCCAATCACACCAGCTACTCTCTCTACGCAGTGGTGAACCACACAGGAGACCTAGACATGGGTCACTACACGGCCCTGTGCCACAGTACCCTGTCCAGCAGCTGGCACCACTTCGACGACACGGCCGTGAGCGAGGTAGTGGACTTCTTGGTGCAGTCTCCTAACGCCTACATCCTGCTGTACAGCCGTCAACCCTTCCACAGACCCAACATACCCCGGATCTGACCCACCACAGGCCCAACATACCCCAGATCTGACCTACCACAGACCCAACATACCCCAGATCTGACCTACCACAGGCCCAACATACCCCGGATCTGACCCACCACAGGCCCAACATACTCCGGATCTGACCCACCACAGACCCAACATACCCCAGATCTGACCCACCACAGACCCCCGATACCCCGGATCTGACCCACCACAGACCCACCATACCCCAGATCTGACCCACCACAGACCCAACAT

Function


NR:

description
PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036981514.1 True 688 mRNA 0.56 3 91239934 91242169

Neighbor


gene id symbol gene type direction distance location
LOC110526812 LOC106587736 coding upstream 43577 91170169 ~ 91196357 (+)
LOC110518689 leo1 coding upstream 176155 91042534 ~ 91063779 (+)
LOC118964968 tmod3 coding upstream 216506 90980724 ~ 91023428 (+)
LOC110526809 LOC106562822 coding upstream 307067 90838122 ~ 90932867 (+)
LOC118964967 NA coding upstream 336685 90902033 ~ 90903249 (+)
LOC110514654 LOC106587893 coding downstream 51490 91293659 ~ 91343222 (+)
LOC110509505 gatm coding downstream 194033 91436202 ~ 91456724 (+)
LOC110511547 pde8a coding downstream 248340 91490509 ~ 91699286 (+)
LOC110518175 LOC106562797 coding downstream 463265 91705434 ~ 91720120 (+)
LOC110517107 LOC106587912 coding downstream 521897 91764066 ~ 91789867 (+)
G559249 NA non-coding upstream 18198 91221209 ~ 91221736 (+)
G559245 NA non-coding upstream 34611 91205040 ~ 91205323 (+)
G559244 NA non-coding upstream 36102 91203611 ~ 91203832 (+)
G559243 NA non-coding upstream 36415 91202861 ~ 91203519 (+)
G559236 NA non-coding upstream 73796 91165824 ~ 91166138 (+)
G559257 NA non-coding downstream 4294 91246463 ~ 91252270 (+)
G559264 NA non-coding downstream 26852 91269021 ~ 91269466 (+)
G559269 NA non-coding downstream 35750 91277919 ~ 91278154 (+)
G559273 NA non-coding downstream 41239 91283408 ~ 91284250 (+)
G559279 NA non-coding downstream 52599 91294768 ~ 91295033 (+)
G559047 NA other upstream 248424 90990786 ~ 90992088 (+)
G559027 NA other upstream 301860 90936917 ~ 90938074 (+)
LOC110527007 pex16 other upstream 519696 90714625 ~ 90727022 (+)
LOC118964972 NA other downstream 727998 91970091 ~ 91973388 (+)
LOC110526817 tipin other downstream 805994 92048098 ~ 92066565 (+)
G560039 NA other downstream 1061359 92303528 ~ 92304637 (+)

Expression



Co-expression Network