XLOC_023976 (kiaa1549la)


Basic Information

Item Value
gene id XLOC_023976
gene name kiaa1549la
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 15354095 ~ 15482419 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047598
GTAAACCCAGCAGAGGTCGTCTTCCACTGCCACATCAGTCCTCATAATAACTCGCCTCATCACCAGTTTGCCtccatcctctctctctcttggaGACGTGCTATTTTTTCCTAATCAAATGCATCCCTTTTCCTCCCCTTCGCAACAACCTTAATGTAAAAGCGGGATTATAGCGTTGACGCTCTCGGATTCCGATGCTGGAAACGCGTTTGATGGAGCGCGATAGAAATAGCCTGCTGTATGAAGACGCGCGTGATTGATGTGTCGGTCACGGATGCTCCTGAATGCGCTTTGCAGACGCATCGCCTTAAACTTTCAATGCTGACACagagctgaaaaacaaaacagtggAGAGAAGACCTCAGTTTAAGGAACTGGAAAGGATAGATCAAATGTCTTTTTCGGGACCTTTCGGCCTATTGCTGAATTTATCTCTAGCCAGATGGCCCCAAGTAACGCGCGTAACAATTTCTACATTTTGGGCTCCGGTTGCGGGAACGGCAAAGCTGGAACCCAACGCACGTCGGAATGGATAGGCTTGTCCTTGTGCAGAAAATATGTGGACGGAGTCTGGACCAAGTGTCTGATATCTATTGGAATTACACTGCTCTTGGTGCCGTCCATATTCGCCATTGACGaTGAAGCAAAGCTCGAGGCATCAGGACAAGCCTTCAGCCCTTCCCAGGATCCAACTGCAGCCCCAAACACCACAGTCTCTTCATCATTGCTGGAGGGTGAGGATTTGGCCTTGCAGTTCCACTCCTCGCCAGAGAGAGCAGAAAGCACAAGGGAGCAGCCTGTGTTCACCTCAGTGCAGACCCTGCAGGTTGCAGAAACTCATTCTCTGCCCTCCCTCCCCAGCAACAGTGACAATCGCACCAATCAAAAGTCCCCAGGGGAGCTGGACGTCAGAGTGCCAAATCCACCGTCCCCGGCAGAGAAAATCAACAGTGTCTTGACCACTAGCTCAGacGAGACTCTTAGTGAATTCCCCAGGAACCCTGATCTACCCACTGCCCCGGGCTCCTCTTTCACAACTCTGGCAGAGACAGACGCCACCCTCACAGACAATGTGACTACTTCAGCCTCTATTTCTGCTTCTAACGCCACTTCACCTGAAAGACCTGAAAATGGTTCATCTGCTACTACAGTACAAAGCAACTCTCACACTGTGACCAGCGACAGTCTCCAACTCACCACAGTGACCACCACGACTGTCACTCCCTTAACTGTGACATCCATGACTGTGACTCCACCCACTCCGGTCGTCATGGTGAAAGAGGTCGAAACCACCATGCCGACTACAACAACCACCCAAACCACAACAACTGAGACAGAACCACCAACAACGagtaccaccaccaccactacaacaactactaccaCCACAACCACAAAAGTAGCACCAACAACTACCAAACCCCCCACAACCACGTTGGCAACTACCACCACAACGACGATGACGACTCCTCAAACCACCACTGTTTCTACCTCTGGAAGTACCATGACTGAACTGAGCACCTCTCCAACTGACAGTTCTCTGGTCTGTAATGTGACCGAAAGGTTATGGGTGAAAACAGTTTTGTCCATCCAGATGCGGCGAAATCGCCTTGAGCCTGGGATGAGACAGAATCTGTCTAAAGGTTTCACGCAGGCGCTGCAAAAAGCATTCAACGACAGCAACATCCGCATACAGATGGAAAAAGACATCTGCACTCCTTCTAATGTGACTGTGGGCTACTTCGTCATGAGAGGGAAGGCTGTGCTCGTGGCGTCGGTTGTAATAGACACTTTAGTTTCCTATGGCTTTGACAAGATATTGACTGATATCAGAGAGTATGTTCCTGTGGTATTGGCCATCCCCAATCCAGTGGCTTCATGGCTACCCACCCTCGGCATCCACTTGCAGCTCAAAACAGTTCTTAGGTTTGTAGGTCCAGCAGATAACATCAAGTCTTGCGGATTCATCCAAATGATGGAGCAACGGTTGGAAAATGTTTTTGCTGAGGCGCAGGAGAAAGTAGAGGACTCCTACGGGACTCTTTCTGTTGAGATTCTGAACACGTATCAAACAGGGAATTCGCTGGCAGTCACGCTGGTGTATGTAGTGTGGAACGGCAGCTCTCCATTGAACGGTACTGTGTCCAGCGGTCTACTTAACCAGCTTACTGCTGAATTGGTGGGCTACTTTCTCTTTTTCCCTCCTCTGATCATCGCTGAGCCTCTAGAATACCACAACCTTAACACTTCAGTAGCAACTCGAGATTACTGGGTAATCACAGTAATTCAAGACGTTGACAGCTCTTCTCTTGAGGGGAGTTATCAGAGCTTTGCTAGTCTAATGGAGCAGCGTCTGGCGGAGCTCTTTCTGGTTGCCAGTCGACACGGCCTCCGCTTCAGGAGAGCCACGACTGTAGGCGACTACACTGTCCAGATGGTCAGTATCCGGCGACTCTCTGGCCCTAAGAATCCAGCTGAGCTGACCTACTACATACAAATGAACGGTTCTCCAATAACCGGCACTACTGCAGCTAAAACCCTCAACACGGTGGACTCTCAGACTATGGCTCTCACTCTAGGCTACTTCATCCAGATTCAAGCTGAGGCGGTGGTCAAGAGTATGCCGAGTAACGTCTGGATCCTGGCGGTCCTGATTCCCGTATCGTTAGTTATAGTCGTGGTAATCATGGCGGCTGCTATTATTTGCCGGAGAAACAGAACCGTTTTCAAGACCAGTGCGTTTCGCAATTTCCATCCCCGCACCAAGACCTCATATCGAAGAGATGGCAGTTACCACCACCAGCCCGTGCAGGGTTTCGATTACGCCAAGCAACACATGGGCCAGACAGGTGAAGAGGCTGTCACTGTCACCAAAGACACCCTCGTCCTGTCCCTCCCCGTACGGGACGCCCCGCTTACACAAGACCGGGTGACGACATTGCAAGATGGGACTGCCTCAAAAAGACCCCAGCCAACAGATATGCATCTCAGCAGGTTGCCAAGCGAGGACGGCTCTCTTTCGAGCAGTGGATCTGGGAAACTGAACACTGGCAGAAGCTCCACAGCTCGCAGATCCACAATACAGAAAACACCCAAAGAAGAGCAGCACGCCAGAAACGaccATTATGACTCTCTAACCGGCTCTCTGCGCCTCATCACCATCAAACCCATGGCGGCTCCGCTCAACTATTCCTATCCGGACTCGTCCAGCCACAGCCAAGACTCTGTCATTCTCAACGGAGAGGTCAACATGGGGCTGAAGCAGAAGTCGGACATTGAGCATTATCGAAATAAGCTGAGGTTAAAAGCCAAAAGGAAAGGTTACAGTGACGGGCCGGGCAGCAGCGGGAGTGGCAGTGGACACATGTACAGCCATCGGGACAGGCTGAGGCGCGAAAACGCTTCCCTGGACCTGGAGGATCTGAGGGGGCCCAAGGAGGACAGGAAACCCTCCACTTATGTAAAGTACCGCAGGAGTGATTCCCACAGGGAGCCAGCATATTGGAGCAGGCAGTCTCTGAACACCCCGAGCCCAGTGGAGACGGAGATGGACATGCTGGTCATGAGGGAGAGATCTAGAAGGGGTATTCGCAACAGTGGCTATGATGGTGAGCCTGAACCCTTTGAAGAGACGGATGTGGACCGTCTTCTGAGTTCCCTGGGCTTTGGAGGTGGCCACCAGGTTAAAGGCCACTCCGACTCATCCACTCTGAGCTCACAGCCCTCCATCGACGAAGTGAGGCAGCAGATGCACCTTCTCTTAGACAACGCCTTTGGTTTAGCCTCTGCCGAACCAACCCCAGcaaaccaccaccaccatcaccaccatCCTCACAGTGCTTACAACCCCAGTCATGGCAGCCCTTACCTGGATGGAGTCACCAGCGCACCTGGGACTATGAACCACCCCAGTGGAGCTCTACAGCGCGGCTCCTCCTTTGGGCCAGACATGCACCAGTGTAGCCTCCCCAAACCAGGATTCAGGTTTACCCAGCTGCCTGATATGGGTTTGGGCTCCCCGCCACCCCTCATTCCTCCAAGAGGTGGAGTCCCACCTGGAACTTCACTTAGATGCTCCACACCAGACATGAGTCTGAAGCCGCGGGTCTCCGAGGCCTCTGAAATGAGTCAGCACAACGGCACCCCTTACCTGCCCATCAACAGAGCTCCGTTCCCTGCTGTCACTGTCGACGAGTCCATGACCAGCTACTCAGGAAACCCAATGACAGCAGTATATGCCATATCTGCCAACCGGCCCGGGTACTCGGACTACTTCGTCCTCTCTCCACCGTCCTCGTACCGCAGCCCGTCCTGGATGTCCTACCCTCCAGAACCAGAGGACCTTCCGCACCAGTGGAACGACACAGTAAAGAACCAGTGTCACCTGGAGACCATCTGCTGAACTGGAGTTATTTCTGATGTTGAGCAGACACAGAATTTTAACAGGGGTTGCACACCACCAAAAAGAATCCCGGATTCAGCGACCCCTAACCGACCACAACACTTGGTTAAAAACAGCCAACCTAACCCCAAAGCCACAAGGTCACCTGCCAGCCTAAGCGAGATGCAGCACCCGATGAACCAACGTCTACAGTGAGGGTAAAACCCACCACAACAACAACCGCTCACTGGCCAAAACTGTGTTTTTCTTAAAGCTTTTTCAAATTAAGAAGTGTTGTATCTTATGCAGGtggttttatgtgcattttaaacaCTTGATTACTAATAACAAACaactaaaacactttttttcttgcTTCATCAATGCCTATCTGTGTCTTTTGCTCTcattcatgcatttaaaaaaaaaaatgtaggtgaTTTTTTTGTGCACTCTCTATGGCTTATGTacgtaaaaaacaaacaaacaacgatGATGACGATGAATGATGTTAAAGAAATTGAACATTTGAAGGGATGTGACATCCTGTACTGTATTTACTGTagtcaaaatgcaaaaaaaaacagtatatgcttttttctttctctcaaaAAATGCCATAGTTTatgctgtattgaagtgtctcaCGATGCACAACCGTTCATGAAAGGCATGAATTGTGTTTTACGTGTGATTTGGGAGGATAGCCATAAAGTGGAcaaatgatgaatggatggagggatTCATATTTTTACTAGCCTTTTTGTAAGAGTAAGGAAAACCGACATATTATATTGCCTTATAAAAAGGTAccaaaatatatatctatatctatatatatgagATCAAGTATGCAGCATATGCCAAAATTGACTTGAAATCTAATTAATTGAAAAGTGTAGCATAGTATTATAATATGACATAAATTTGCTACAACTAAGCAAGTACGGTGTTACAGAAGTAACATTAGGCATGTGTTCTTATAAGAATGAGTCTTATGCATGTAGTTTGGACATATGAATCATAAGGGCTTTGTATGTCAAGAAAGTCCCATATTTTATTGGGCAGTTATAGAACGGATGTCTACTGTAAAAAGAGTCATACATGGCAAATATCCCATTAAGTAGTTGCTACATGTTACTGTACTTTAAAAAcctttctttaatttatttttggggtTAAAAGTCTGTTTTGTTGCGATGAATCAAGCTAGATAATCGGATTATGAAAATAACATAATGTGTTGTGTAAATTATTACAAATGCCACTGTTGTTTGATTTGTGTTGAAATGAACATTGTCCTTTCTGTTTAACTTCGGTGGTGCGGGGGATGTGCAAATATCATGTAATTAAGGTTTTCTTTTCAAAAGTTTTTATATCAATCAAATCACCCTCTTTTTTTGGCCAACAACGAAGGACattctgctaaaaaaaaatgctaccaATGTAAAATATTGTGCTTCAGatgttaaaaaaagacaaaaagaccaaaaaaaaaaagcctcgtTGTGAACCTATGTGAAAAAATTGTGTAATAATCATTATGTGTACATCATCATAACAAATAAGATGTTGACTTCTTTTCCTACTTATACAACACTAAACAACCATATTTGCCAGATGTACTGTATATTTCCCTTcgttaatgtaaaaaaaagcgCTTTAAATGTTCTTGttacttttcttttcttcctGATGATTTTATTGAGCATATTGTAAAATAACCATCATTTCAATGGTTTAACACTTTGGAGGACTCATGTTTTTGTGGGTTACACACTGAATCAAAtctaataaaaactaagaaacatttgatcattttaaaaatgataaaaa

Function

symbol description
kiaa1549la Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human KIAA1549L (KIAA1549 like).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-061207-55 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human KIAA1549L (KIAA1549 like).

Ensembl:

ensembl_id ENSDARG00000062477

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047598 True 6217 mRNA 0.47 23 15354095 15482419

Neighbor

gene id symbol gene type direction distance location
XLOC_023975 hipk3a coding upstream 2651 15287036 ~ 15351444 (+)
XLOC_023974 tcp11l1 coding upstream 68505 15273370 ~ 15285590 (+)
XLOC_023972 AL929172.2 coding upstream 219377 15134602 ~ 15134718 (+)
XLOC_023970 NA coding upstream 227791 15100538 ~ 15126304 (+)
XLOC_023971 AL929172.1 coding upstream 234365 15119597 ~ 15119730 (+)
XLOC_023977 NA coding downstream 1854 15484273 ~ 15486780 (+)
XLOC_023978 BX323543.2 coding downstream 5075 15487494 ~ 15489644 (+)
XLOC_023979 BX323543.4 coding downstream 7793 15490212 ~ 15490667 (+)
XLOC_023980 NA coding downstream 58347 15540766 ~ 15609995 (+)
XLOC_023981 spon1b coding downstream 165331 15647750 ~ 15800834 (+)
XLOC_023973 CR762411.1 misc upstream 135986 15217824 ~ 15218109 (+)
XLOC_023969 NA non-coding upstream 319511 14931982 ~ 15034584 (+)
XLOC_023966 CR388067.1 non-coding upstream 669748 14684233 ~ 14684347 (+)
XLOC_023985 NA non-coding downstream 584458 16066877 ~ 16075816 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000115_01672006_01704340 KIAA1549L, KIAA1549LA coding CI01000115 null 1672006 ~ 1704340 (+)