XLOC_023977


Basic Information

Item Value
gene id XLOC_023977
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 15484273 ~ 15486780 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049033
TGATCAGTCACATCTCTACCTACCAAGGTGTCTTTTCTGTCGGACTATCCGGGCGGGGCAGCTGTCAGAACGGCTGAGGAGGCCACGAAAAAGCATACGGCAAGATGATGATGCTACGTCACATTGTGGAAAACTGAATGGATGCAGACATCTTACATACTGGTGTGTGCAGTGATGACGATGAAGAACAGCAGTGTGCTGATGAAGGAAAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049033 True 212 lncRNA 0.49 3 15484273 15486780

Neighbor

gene id symbol gene type direction distance location
XLOC_023976 kiaa1549la coding upstream 1854 15354095 ~ 15482419 (+)
XLOC_023975 hipk3a coding upstream 132829 15287036 ~ 15351444 (+)
XLOC_023974 tcp11l1 coding upstream 198683 15273370 ~ 15285590 (+)
XLOC_023972 AL929172.2 coding upstream 349555 15134602 ~ 15134718 (+)
XLOC_023970 NA coding upstream 357969 15100538 ~ 15126304 (+)
XLOC_023978 BX323543.2 coding downstream 714 15487494 ~ 15489644 (+)
XLOC_023979 BX323543.4 coding downstream 3432 15490212 ~ 15490667 (+)
XLOC_023980 NA coding downstream 53986 15540766 ~ 15609995 (+)
XLOC_023981 spon1b coding downstream 160970 15647750 ~ 15800834 (+)
XLOC_023982 syt9b coding downstream 354890 15841670 ~ 15905903 (+)
XLOC_023973 CR762411.1 misc upstream 266164 15217824 ~ 15218109 (+)
XLOC_023971 AL929172.1 non-coding upstream 364543 15119597 ~ 15119730 (+)
XLOC_023969 NA non-coding upstream 449689 14931982 ~ 15034584 (+)
XLOC_023966 CR388067.1 non-coding upstream 799926 14684233 ~ 14684347 (+)
XLOC_023985 NA non-coding downstream 580097 16066877 ~ 16075816 (+)
XLOC_023987 CR759887.4 non-coding downstream 688122 16174902 ~ 16185861 (+)

Expression


Co-expression Network