Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110516630 |
| gene name | LOC106593851 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 93588104 ~ 93590916 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C-C motif chemokine 13-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021595015.2 | False | 559 | mRNA | 0.45 | 3 | 93588104 | 93590916 |
| TU636903 | True | 476 | TUCP | 0.48 | 3 | 93588138 | 93590867 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516629 | LOC106562562 | coding | downstream | 3174 | 93576252 ~ 93584930 (-) |
| LOC110514126 | LOC106594374 | coding | downstream | 102046 | 93482937 ~ 93486058 (-) |
| LOC110526847 | LOC106592787 | coding | downstream | 157910 | 93424554 ~ 93430194 (-) |
| cdhr5a | LOC106587968 | coding | downstream | 225598 | 93325891 ~ 93362506 (-) |
| LOC110526833 | LOC106592039 | coding | downstream | 316061 | 93256819 ~ 93272043 (-) |
| LOC110515104 | LOC106587932 | coding | upstream | 1855 | 93592771 ~ 93594378 (-) |
| LOC118964988 | NA | coding | upstream | 23350 | 93614266 ~ 93633046 (-) |
| LOC110513840 | LOC106587940 | coding | upstream | 73749 | 93664665 ~ 93672827 (-) |
| nqo1 | LOC106587985 | coding | upstream | 83833 | 93674749 ~ 93689064 (-) |
| LOC110514407 | LOC106562781 | coding | upstream | 200884 | 93791800 ~ 93808569 (-) |
| G561068 | NA | non-coding | downstream | 2437 | 93585368 ~ 93585667 (-) |
| G561066 | NA | non-coding | downstream | 9036 | 93578766 ~ 93579068 (-) |
| G561065 | NA | non-coding | downstream | 9382 | 93578490 ~ 93578722 (-) |
| G561062 | NA | non-coding | downstream | 15912 | 93570947 ~ 93572192 (-) |
| G561064 | NA | non-coding | downstream | 17241 | 93570300 ~ 93570863 (-) |
| G561071 | NA | non-coding | upstream | 6803 | 93597719 ~ 93597930 (-) |
| G561073 | NA | non-coding | upstream | 13451 | 93604367 ~ 93604751 (-) |
| G561076 | NA | non-coding | upstream | 19478 | 93610394 ~ 93611961 (-) |
| G561082 | NA | non-coding | upstream | 37798 | 93628714 ~ 93642796 (-) |
| G560973 | NA | other | downstream | 262929 | 93322585 ~ 93325175 (-) |
| G560725 | NA | other | downstream | 465753 | 93120371 ~ 93122351 (-) |
| G560709 | NA | other | downstream | 488872 | 93097173 ~ 93099232 (-) |
| G560363 | NA | other | downstream | 1007192 | 92579897 ~ 92581291 (-) |
| G561086 | NA | other | upstream | 51985 | 93642901 ~ 93661972 (-) |
| G561730 | NA | other | upstream | 554674 | 94145590 ~ 94148159 (-) |
| G561786 | NA | other | upstream | 713064 | 94303980 ~ 94305434 (-) |
| G561791 | NA | other | upstream | 745636 | 94336552 ~ 94343200 (-) |
| LOC110525058 | herc1 | other | upstream | 798368 | 94324853 ~ 94566837 (-) |
