LOC118965004


Basic Information

Item Value
gene id LOC118965004
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 97944256 ~ 97947528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052367.1
TCTGTTATACCCTGGGATGAAAGACTAGTTCTGATATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGAATCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGATATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCGGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTCGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGACTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGgctagttctgttatactctggGATGAAAGGCTAGTTCTGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGACTAGTTCTGATATACCCTGGGATGATAGGCTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGAAATACCCTGGGATGAAAGGCTAATTCTGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGATCACCTATTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGATCACCTATTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGATCACCTATTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGgctagttctgttatactctggGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGGATCAGTCAGGATACTCTTCAAAAAAGGTCCAAAGCAACATGTTTATTTTTTGGCATTCTGGTACGACTCTTTTTACAGTGTCTTCACATAACGTCAGATTCCTCCATCTTGTTTTACTGTGGTGGTGTTGTAGTTTTGTTCTGTGTCTCGGTCTGTTGCCACTTCCTGTAGCCGTTCAGGTCTGACTGAGGGTGTATCCCAAATAGCAACCTATTCATTATGTAGGGgattactgttgaccagagacctatggccaaaactagtgcactatatatagtgaataaggtgctatttgtgACGTGAGCCTGACTCCAGGTCAGTTCCCTGACAGGTCAGAGCCAGTGGGTCTGAGAGGCTGAGGTCCTGTACTCCTGATCGTAGTAGATCTGTCCTCCCAGCTGAGTGACTCGGGGCTGTTGTGCtgtagaacagagggaggagaatggtACACAccgagagaagaagaagagagagaggctactttCACCGGTACACAccgagagaagaagaagagagagaggctactttCACCAGTACACAccgagagaagaagaagagagagaggctactttCACCTACAGTttcaaattaaaaaaaataaaaataaaaaatgtttcttGTTCATatacattttgtttgtttttaagatGGCATTAAGAAGAAAGGAAAACCTCTAAATgtacattgtctgtctgtaaatATTTGCACCGGTGGTGCTCTCTGGTTCTAGTATTGTGTAGGAGAGGAAGACTGTGATAGCGGTGTACATGTATCAACCTGTAGAAAGCAGCAGGGAATCACCATTCAACACACAAAATGACTTTCCACTCGTTGAATCTGGAGCATGAATGTCTTCATCCCCTGTCATCTCTCTTCATCCTAACACGTTCAAACTTTTAATAAACATGTGTTGGCTTTTGTATCCAGAA
>XR_005052368.1
TCTGTTATACCCTGGGATGAAAGACTAGTTCTGATATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGAATCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGATATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCGGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTCGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGACTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGgctagttctgttatactctggGATGAAAGGCTAGTTCTGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGACTAGTTCTGATATACCCTGGGATGATAGGCTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGAAATACCCTGGGATGAAAGGCTAATTCTGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGATCACCTATTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGATCACCTATTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGATCACCTATTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGgctagttctgttatactctggGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGGATCAGTCAGGATACTCTTCAAAAAAGGTCCAAAGCAACATGTTTATTTTTTGGCATTCTGGTACGACTCTTTTTACAGTGTCTTCACATAACGTCAGATTCCTCCATCTTGTTTTACTGTGGTGGTGTTGTAGTTTTGTTCTGTGTCTCGGTCTGTTGCCACTTCCTGTAGCCGTTCAGGTCTGACTGAGGGTGTATCCCAAATAGCAACCTATTCATTATGTAGGGgattactgttgaccagagacctatggccaaaactagtgcactatatatagtgaataaggtgctatttgtgACGTGAGCCTGACTCCAGGTCAGTTCCCTGACAGGTCAGAGCCAGTGGGTCTGAGAGGCTGAGGTCCTGTACTCCTGATCGTAGTAGATCTGTCCTCCCAGCTGAGTGACTCGGGGCTGTTGTGCtgtagaacagagggaggagaatggtACACAccgagagaagaagaagagagagaggctactttCACCGGTACACAccgagagaagaagaagagagagaggctactttCACCAGTACACAccgagagaagaagaagagagagaggctactttCACCTACAGTttcaaattaaaaaaaataaaaataaaaaatgtttcttGTTCATatacattttgtttgtttttaagatGGCATTAAGAAGAAAGGAAAACCTCTAAATgtacattgtctgtctgtaaatATTTGCACCGGTGGTGCTCTCTGGTTCTAGTATTGTGTAGGAGAGGAAGACTGTGATAGCGGTGTACATGTATCAACCTGTAGAAAGCAGCAGGGAATCACCATTCAACACACAAAATGACTTTCCACTCGTTGAATCTGGAGCATGAATGTCTTCATCCCCTGTCATCTCTCTTCATCCTAACACGTTCAAACTTTTAATAAACATGTGTTGGCTTTTGTATCCAGAA
>XR_005052369.1
TCTGTTATACCCTGGGATGAAAGACTAGTTCTGATATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGAATCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGATATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCGGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTCGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGACTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGgctagttctgttatactctggGATGAAAGGCTAGTTCTGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGACTAGTTCTGATATACCCTGGGATGATAGGCTAGTTCTGTTATACCCTGGGATGAAAGACTAGTTCTGAAATACCCTGGGATGAAAGGCTAATTCTGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGATCACCTATTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGATCACCTATTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGATCACCTATTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGgctagttctgttatactctggGATGAAAGACTAGTTCTGGTTCACCTGTTGATTGATGTTATACCCTGGGATGAAAGGCTAGTTCTGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGGTTCACCTGTTGATTGATGATATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGTTATACCCTGGGATGAAAGGCTAGTTCTGGATCAGTCAGGATACTCTTCAAAAAAGGTCCAAAGCAACATGTTTATTTTTTGGCATTCTGGTACGACTCTTTTTACAGTGTCTTCACATAACGTCAGATTCCTCCATCTTGTTTTACTGTGGTGGTGTTGTAGTTTTGTTCTGTGTCTCGGTCTGTTGCCACTTCCTGTAGCCGTTCAGGTCTGACTGAGGGTGTATCCCAAATAGCAACCTATTCATTATGTAGGGgattactgttgaccagagacctatggccaaaactagtgcactatatatagtgaataaggtgctatttgtgACGTGAGCCTGACTCCAGGTCAGTTCCCTGACAGGTCAGAGCCAGTGGGTCTGAGAGGCTGAGGTCCTGTACTCCTGATCGTAGTAGATCTGTCCTCCCAGCTGAGTGACTCGGGGCTGTTGTGCtgtagaacagagggaggagaatggtACACAccgagagaagaagaagagagagaggctactttCACCGGTACACAccgagagaagaagaagagagagaggctactttCACCAGTACACAccgagagaagaagaagagagagaggctactttCACCTACAGTttcaaattaaaaaaaataaaaataaaaaatgtttcttGTTCATatacattttgtttgtttttaagatGGCATTAAGAAGAAAGGAAAACCTCTAAATgtacattgtctgtctgtaaatATTTGCACCGGTGGTGCTCTCTGGTTCTAGTATTGTGTAGGAGAGGAAGACTGTGATAGCGGTGTACATGTATCAACCTGTAGAAAGCAGCAGGGAATCACCATTCAACACACAAAATGACTTTCCACTCGTTGAATCTGGAGCATGAATGTCTTCATCCCCTGTCATCTCTCTTCATCCTAACACGTTCAAACTTTTAATAAACATGTGTTGGCTTTTGTATCCAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052367.1 False 3215 mRNA 0.43 2 97944256 97947528
XR_005052368.1 False 3186 mRNA 0.43 2 97944256 97947528
XR_005052369.1 True 3157 mRNA 0.43 2 97944256 97947528
Loading

Neighbor

gene id symbol gene type direction distance location
plekhg4 LOC106594058 coding upstream 481 97797659 ~ 97943775 (+)
LOC118936669 NA coding upstream 147635 97679917 ~ 97796621 (+)
LOC110513174 LOC106588022 coding upstream 273965 97536534 ~ 97670291 (+)
LOC110516620 LOC106562854 coding upstream 414352 97369711 ~ 97529904 (+)
LOC118965002 NA coding upstream 591396 97350492 ~ 97353435 (+)
LOC118965006 NA coding downstream 256843 98204371 ~ 98206233 (+)
hsd11b2 LOC100135822 coding downstream 489029 98436557 ~ 98488276 (+)
LOC118965093 agrp1 coding downstream 623178 98570706 ~ 98575061 (+)
LOC118965094 NA coding downstream 651719 98599247 ~ 98600304 (+)
LOC110516022 LOC105025469 coding downstream 732892 98680420 ~ 98724380 (+)
G563580 NA non-coding upstream 36938 97906674 ~ 97907318 (+)
G563576 NA non-coding upstream 48868 97892603 ~ 97895388 (+)
G563569 NA non-coding upstream 68062 97875597 ~ 97876194 (+)
G563570 NA non-coding upstream 68137 97875129 ~ 97876119 (+)
G563566 NA non-coding upstream 77783 97865618 ~ 97866473 (+)
G563596 NA non-coding downstream 2545 97950073 ~ 97951916 (+)
G563610 NA non-coding downstream 23888 97971416 ~ 97971991 (+)
G563611 NA non-coding downstream 24579 97972107 ~ 97975265 (+)
G563612 NA non-coding downstream 47849 97995377 ~ 97995756 (+)
G563613 NA non-coding downstream 61195 98008723 ~ 98008995 (+)
G563588 NA other upstream 21222 97922631 ~ 97923034 (+)
G562740 NA other upstream 1457031 96481834 ~ 96487225 (+)
G562719 NA other upstream 1556316 96384736 ~ 96387940 (+)
G564164 NA other downstream 533052 98480580 ~ 98483302 (+)
LOC110526849 vps13c other downstream 852982 98789830 ~ 99009256 (+)
G564500 NA other downstream 1120379 99067907 ~ 99068597 (+)
LOC110498619 LOC105016647 other downstream 1477364 99424686 ~ 99469650 (+)

Expression

LOC118965004 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

LOC118965004 Expression in each Bioproject

Bar chart with 20 bars.
LOC118965004 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network