XLOC_023992 (CR376785.1)


Basic Information

Item Value
gene id XLOC_023992
gene name CR376785.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 16516154 ~ 16516562 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047632
caatgactgtaaaaaatatggacgacgcgacagcccttttccccattgaacgccttgagggcaaaacgcctgcttgacgggcacaaactgtcgcaaaagactgctgaaattggagccttgacatgcgcagaaggactgtctgatggagccagaggaggagccgcgaaattgagcggagtcgagcttccaaccaaacgctttatgtaaaatcaaccacgccccccgaacttctcactcgactgccggtgtctgcactataacaaacgctcactgatgtaaatagaagcacttgcattaaaaaaaaaacacaataatatacggtttaaaaacggtgtgatgtaagctgttaaactttaataaaagcaatacatggtggactgcagaaataaacgatcttttatacactcta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097999

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047632 True 409 lncRNA 0.44 1 16516154 16516562

Neighbor

gene id symbol gene type direction distance location
XLOC_023991 tead1a coding upstream 84555 16356083 ~ 16431599 (+)
XLOC_023990 parvaa coding upstream 170724 16312258 ~ 16345430 (+)
XLOC_023989 mical2b coding upstream 206407 16194450 ~ 16309747 (+)
XLOC_023988 CR759887.2 coding upstream 324052 16186344 ~ 16192102 (+)
XLOC_023987 CR759887.4 coding upstream 330293 16174902 ~ 16185861 (+)
XLOC_023993 atp6v1e1a coding downstream 85277 16601839 ~ 16613912 (+)
XLOC_023994 cecr2 coding downstream 129551 16646113 ~ 16688641 (+)
XLOC_023995 ada2a coding downstream 173071 16689633 ~ 16700924 (+)
XLOC_023996 BX004976.2 coding downstream 215240 16731802 ~ 16774774 (+)
XLOC_023997 BX004976.1 coding downstream 255229 16771791 ~ 16771908 (+)
XLOC_023973 CR762411.1 misc upstream 1298045 15217824 ~ 15218109 (+)
XLOC_023985 NA non-coding upstream 440338 16066877 ~ 16075816 (+)
XLOC_023980 NA non-coding upstream 906159 15540766 ~ 15609995 (+)
XLOC_023979 BX323543.4 non-coding upstream 1025487 15490212 ~ 15490667 (+)
XLOC_023998 NA non-coding downstream 313322 16829884 ~ 16836949 (+)
XLOC_024002 NA non-coding downstream 441610 16958172 ~ 16960501 (+)
XLOC_024007 NA non-coding downstream 986434 17502996 ~ 17510419 (+)
XLOC_024008 NA non-coding downstream 1012219 17528781 ~ 17535916 (+)

Expression


Co-expression Network