G463822


Basic Information

Item Value
gene id G463822
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 278364 ~ 278977 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU526510
tagagcgttgggccagtaaccagcaggtagcctaatggttagagcgttgggccagtaaccagcaggtagcctagtggttagagcgttgggccagtaaccagcaggtagcctagtggttagagcgttggactagtaaccagcaggtagcctagtggttagagcgttggactagtaaccagcaggtagcctagtggttagagcgttgggccagtaaccagcaggta
>TU526509
agtggttagagtgttggactagtaaccagcaggtagcctagtggttagagcgttgggccagtaaccagcaggtagcctagtggttaaagcattgggtcagtaaccagcaggtagcctagtggttagagtgttggactagtaaccagcaggtagcctagtggttagagcgttggactagtaaccagcaggtagcctagtggttagagcgttgggccagtaaccagcaggta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU526510 False 224 lncRNA 0.54 2 278364 278977
TU526509 True 230 lncRNA 0.51 2 278592 278977

Neighbor

gene id symbol gene type direction distance location
LOC118964800 LOC105008036 coding upstream 202500 56073 ~ 77877 (+)
LOC118964799 isca1 coding upstream 229363 43896 ~ 52580 (+)
LOC110525138 rufy3 coding downstream 163739 442716 ~ 549899 (+)
LOC118964801 NA coding downstream 264127 543104 ~ 545704 (+)
LOC110525134 NA coding downstream 272804 551781 ~ 554254 (+)
LOC118964804 NA coding downstream 276187 555164 ~ 555893 (+)
tars1 LOC106585996 coding downstream 285300 564277 ~ 602519 (+)
G463805 NA non-coding upstream 26105 251401 ~ 252259 (+)
G463798 NA non-coding upstream 34393 243721 ~ 243971 (+)
G463786 NA non-coding upstream 68350 209366 ~ 210014 (+)
G463732 NA non-coding upstream 174644 102971 ~ 103720 (+)
G463724 NA non-coding upstream 188340 88928 ~ 90024 (+)
G463823 NA non-coding downstream 309 279286 ~ 279902 (+)
G463828 NA non-coding downstream 9956 288933 ~ 289261 (+)
G463829 NA non-coding downstream 11689 290666 ~ 291834 (+)
G463849 stambp non-coding downstream 36353 315330 ~ 316561 (+)
G463850 NA non-coding downstream 43782 322759 ~ 328447 (+)
G463813 NA other upstream 10213 265409 ~ 268151 (+)
G464705 NA other downstream 949728 1228705 ~ 1229099 (+)
G465203 NA other downstream 1783351 2062328 ~ 2064067 (+)
zfr zfr other downstream 2120784 2342330 ~ 2451362 (+)
G465355 NA other downstream 2126142 2405119 ~ 2406090 (+)

Expression


Co-expression Network