G463880


Basic Information

Item Value
gene id G463880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 418112 ~ 418320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU526594
actggcagtgacagctggattaaagccccacattaaacccttccctactagcagttacagctggattaaagccccacattaaacccatctctactggcagttacagctggattaaagccccacattaaacccttctctactggcagttatGAAtcgattaaagccccacattaaacccttctctactggcagtgacagctggattaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU526594 True 209 lncRNA 0.45 1 418112 418320

Neighbor

gene id symbol gene type direction distance location
LOC118964800 LOC105008036 coding upstream 342248 56073 ~ 77877 (+)
LOC118964799 isca1 coding upstream 369111 43896 ~ 52580 (+)
LOC110525138 rufy3 coding downstream 24396 442716 ~ 549899 (+)
LOC118964801 NA coding downstream 124784 543104 ~ 545704 (+)
LOC110525134 NA coding downstream 133461 551781 ~ 554254 (+)
LOC118964804 NA coding downstream 136844 555164 ~ 555893 (+)
tars1 LOC106585996 coding downstream 145957 564277 ~ 602519 (+)
G463879 NA non-coding upstream 2162 415456 ~ 415950 (+)
G463878 NA non-coding upstream 3350 414534 ~ 414762 (+)
G463863 NA non-coding upstream 62537 354993 ~ 355575 (+)
G463835 NA non-coding upstream 69564 341774 ~ 348548 (+)
G463861 NA non-coding upstream 78059 339198 ~ 340053 (+)
G463881 NA non-coding downstream 3543 421863 ~ 422084 (+)
G463882 NA non-coding downstream 4573 422893 ~ 423101 (+)
G463883 NA non-coding downstream 6119 424439 ~ 424720 (+)
G463884 NA non-coding downstream 9247 427567 ~ 428566 (+)
G463889 NA non-coding downstream 16833 435153 ~ 435427 (+)
G463813 NA other upstream 149961 265409 ~ 268151 (+)
G464705 NA other downstream 810385 1228705 ~ 1229099 (+)
G465203 NA other downstream 1644008 2062328 ~ 2064067 (+)
zfr zfr other downstream 1981441 2342330 ~ 2451362 (+)
G465355 NA other downstream 1986799 2405119 ~ 2406090 (+)

Expression


Co-expression Network