G463892


Basic Information

Item Value
gene id G463892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 436884 ~ 437163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU526612
TTTATGACCATCTCTCTGCAGACTGGACACCCAGGAAGCAGATTCTCAGTATGATGTATTACTGGACTATTGGCAGTCAGATGGCAATCCTAGAGAGAACTAGTATCACTACTGTAGTTTACAACTGGAGactagtggaggagagagaactaGTATCACTACTGTAGTTTACAACTGGAGactagtggaggagagagaactaGTATCACTACTGTAGTTTACAactagtctagtggaggagagagaactaGTAGCTGGTGGTGGTAATACACCATTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU526612 True 280 lncRNA 0.43 1 436884 437163

Neighbor

gene id symbol gene type direction distance location
LOC118964800 LOC105008036 coding upstream 361020 56073 ~ 77877 (+)
LOC118964799 isca1 coding upstream 387883 43896 ~ 52580 (+)
LOC110525138 rufy3 coding downstream 5553 442716 ~ 549899 (+)
LOC118964801 NA coding downstream 105941 543104 ~ 545704 (+)
LOC110525134 NA coding downstream 114618 551781 ~ 554254 (+)
LOC118964804 NA coding downstream 118001 555164 ~ 555893 (+)
tars1 LOC106585996 coding downstream 127114 564277 ~ 602519 (+)
G463891 NA non-coding upstream 55 436229 ~ 436829 (+)
G463889 NA non-coding upstream 1457 435153 ~ 435427 (+)
G463884 NA non-coding upstream 8318 427567 ~ 428566 (+)
G463883 NA non-coding upstream 12164 424439 ~ 424720 (+)
G463882 NA non-coding upstream 13783 422893 ~ 423101 (+)
G463894 NA non-coding downstream 486 437649 ~ 438321 (+)
G463893 NA non-coding downstream 1413 438576 ~ 438922 (+)
G464092 NA non-coding downstream 17154 454317 ~ 455090 (+)
G464120 NA non-coding downstream 96775 533938 ~ 534393 (+)
G464067 NA non-coding downstream 130487 567650 ~ 570254 (+)
G463813 NA other upstream 168733 265409 ~ 268151 (+)
G464705 NA other downstream 791542 1228705 ~ 1229099 (+)
G465203 NA other downstream 1625165 2062328 ~ 2064067 (+)
zfr zfr other downstream 1962598 2342330 ~ 2451362 (+)
G465355 NA other downstream 1967956 2405119 ~ 2406090 (+)

Expression


Co-expression Network