G463894


Basic Information

Item Value
gene id G463894
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 437649 ~ 438321 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU526614
GGCTATATTTATAAAAAACTGGGTGACATTAAAATCAAACatttgtcatatgcgccgaaATAGTGCTGAAACACTGTTAATTAATGGAATAGGAAATGTATCGGCGTTACGAGTTGGCAAAGCCTAGGTGACCCAAGATCAACAAGTAACAAGAGTCTTCACTCACTAGACTAGAAGTAACAAGAACCTTCACTCACTAGACGAGAAGTAACAAGAGCCTTCACTCACTAGACTAGAAGTAACAAGAGCCTTCACTCACTAGACTAGAAGTAACAAGAGCCTTCACTCACTGGACTAGAAGTAACAAGAGCCTTCACTCACTAGTCTAGAAGTAACAAGAGCCTTCACTCACTAGACTAGAAGTAACAAGAGCCTTCACTCACTAGACTAGAAGTAACAAGAGCCTTCACTCACTAGACTAGAAGTAACAAGAGCCTTCACTCACTAGACTAGAAGTAACAAGAGCCTTCACTCACTAGACTAAAAGTAACAAGAGTCTTCACTCACTAGACTAGAAGTAACAAGAGTCTTCACTCACTAGACTAGAAGTAACAAGAGTCTTCACTCACTAGACTAGAAGTAACAAGAGCCTTCACTCACTAGACTAGAAGTAACAAGAGTCTTCACTCACTAGACTAGAAGTAACAAGAGTCTTCACTCACTAGACTAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU526614 True 673 lncRNA 0.40 1 437649 438321

Neighbor

gene id symbol gene type direction distance location
LOC118964800 LOC105008036 coding upstream 361785 56073 ~ 77877 (+)
LOC118964799 isca1 coding upstream 388648 43896 ~ 52580 (+)
LOC110525138 rufy3 coding downstream 4395 442716 ~ 549899 (+)
LOC118964801 NA coding downstream 104783 543104 ~ 545704 (+)
LOC110525134 NA coding downstream 113460 551781 ~ 554254 (+)
LOC118964804 NA coding downstream 116843 555164 ~ 555893 (+)
tars1 LOC106585996 coding downstream 125956 564277 ~ 602519 (+)
G463892 NA non-coding upstream 486 436884 ~ 437163 (+)
G463891 NA non-coding upstream 820 436229 ~ 436829 (+)
G463889 NA non-coding upstream 2222 435153 ~ 435427 (+)
G463884 NA non-coding upstream 9083 427567 ~ 428566 (+)
G463883 NA non-coding upstream 12929 424439 ~ 424720 (+)
G463893 NA non-coding downstream 255 438576 ~ 438922 (+)
G464092 NA non-coding downstream 15996 454317 ~ 455090 (+)
G464120 NA non-coding downstream 95617 533938 ~ 534393 (+)
G464067 NA non-coding downstream 129329 567650 ~ 570254 (+)
G464126 NA non-coding downstream 155006 593327 ~ 599273 (+)
G463813 NA other upstream 169498 265409 ~ 268151 (+)
G464705 NA other downstream 790384 1228705 ~ 1229099 (+)
G465203 NA other downstream 1624007 2062328 ~ 2064067 (+)
zfr zfr other downstream 1961440 2342330 ~ 2451362 (+)
G465355 NA other downstream 1966798 2405119 ~ 2406090 (+)

Expression


Co-expression Network