G463893


Basic Information

Item Value
gene id G463893
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 438576 ~ 438922 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU526613
CATTCCATAGGCGCCCTCGCCAATATAGGAGAGATTGTGGTAGCGAGGGCCGACATCGAAGGCCTGTCCTCGGACTAACTCAGCGCCAGATCCGGGGTTGGGGCCGCTGCCAGCACTGGCAGATACTGCTGCTGTCGCCATTGTGAAAACTAGCTGTATTTTTAACACGTTCTCCACAGCCAAAAAGAAAGGGATAATACGAAAAGTCACCGCTGTAATAACGTTATACAACACAGTGAGACTTTATGAAGTCCTCAGTAACGGCGAAAGAGAGTAAGAAAAGTAATTTGTCCGCTCCTCGGCGCTATAACGTGTACAAAGCCTGATTCCACTGACTGCAGTCTGCT

Function

NR:

description
PREDICTED: mitogen-activated protein kinase 1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU526613 True 347 lncRNA 0.50 1 438576 438922

Neighbor

gene id symbol gene type direction distance location
LOC118964800 LOC105008036 coding upstream 362712 56073 ~ 77877 (+)
LOC118964799 isca1 coding upstream 389575 43896 ~ 52580 (+)
LOC110525138 rufy3 coding downstream 3794 442716 ~ 549899 (+)
LOC118964801 NA coding downstream 104182 543104 ~ 545704 (+)
LOC110525134 NA coding downstream 112859 551781 ~ 554254 (+)
LOC118964804 NA coding downstream 116242 555164 ~ 555893 (+)
tars1 LOC106585996 coding downstream 125355 564277 ~ 602519 (+)
G463894 NA non-coding upstream 255 437649 ~ 438321 (+)
G463892 NA non-coding upstream 1413 436884 ~ 437163 (+)
G463891 NA non-coding upstream 1747 436229 ~ 436829 (+)
G463889 NA non-coding upstream 3149 435153 ~ 435427 (+)
G463884 NA non-coding upstream 10010 427567 ~ 428566 (+)
G464092 NA non-coding downstream 15395 454317 ~ 455090 (+)
G464120 NA non-coding downstream 95016 533938 ~ 534393 (+)
G464067 NA non-coding downstream 128728 567650 ~ 570254 (+)
G464126 NA non-coding downstream 154405 593327 ~ 599273 (+)
G464132 NA non-coding downstream 167475 606397 ~ 608103 (+)
G463813 NA other upstream 170425 265409 ~ 268151 (+)
G464705 NA other downstream 789783 1228705 ~ 1229099 (+)
G465203 NA other downstream 1623406 2062328 ~ 2064067 (+)
zfr zfr other downstream 1960839 2342330 ~ 2451362 (+)
G465355 NA other downstream 1966197 2405119 ~ 2406090 (+)

Expression


Co-expression Network