G464092


Basic Information

Item Value
gene id G464092
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 454317 ~ 455090 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU526902
ACCACACGCTTTCCCTCTATCACTTTTTCAATACGGTGGATGGAAAGGGGTATGCCAGGTGTactctctgcctgaaagagaccaattatgccaacaaaggatctcatgctctgctggcacattgtagaacagatgtccacaggcagaaagtgtacaatgtaataaagtgtcACCTTTTTGGTCCCTCAGAAGTTTGTATCCCTGTATTATGTAAAATAAAGAACTGAATGGTGTGGCAGCACTATGAGGTAACATAAAGAACTGAATGGTGTGGCAGCACTATGAGGTAACATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU526902 True 295 lncRNA 0.42 2 454317 455090

Neighbor

gene id symbol gene type direction distance location
LOC118964800 LOC105008036 coding upstream 378453 56073 ~ 77877 (+)
LOC118964799 isca1 coding upstream 405316 43896 ~ 52580 (+)
LOC118964801 NA coding downstream 88014 543104 ~ 545704 (+)
LOC110525134 NA coding downstream 96691 551781 ~ 554254 (+)
LOC118964804 NA coding downstream 100074 555164 ~ 555893 (+)
tars1 LOC106585996 coding downstream 109187 564277 ~ 602519 (+)
slc4a4a LOC101484802 coding downstream 320574 775664 ~ 1118589 (+)
G463893 NA non-coding upstream 15395 438576 ~ 438922 (+)
G463894 NA non-coding upstream 15996 437649 ~ 438321 (+)
G463892 NA non-coding upstream 17154 436884 ~ 437163 (+)
G463891 NA non-coding upstream 17488 436229 ~ 436829 (+)
G463889 NA non-coding upstream 18890 435153 ~ 435427 (+)
G464120 NA non-coding downstream 78848 533938 ~ 534393 (+)
G464067 NA non-coding downstream 112560 567650 ~ 570254 (+)
G464126 NA non-coding downstream 138237 593327 ~ 599273 (+)
G464132 NA non-coding downstream 151307 606397 ~ 608103 (+)
G464138 NA non-coding downstream 160030 615120 ~ 615541 (+)
G463813 NA other upstream 186166 265409 ~ 268151 (+)
LOC110525138 rufy3 other downstream 1743 442716 ~ 549899 (+)
G464705 NA other downstream 773615 1228705 ~ 1229099 (+)
G465203 NA other downstream 1607238 2062328 ~ 2064067 (+)
zfr zfr other downstream 1944671 2342330 ~ 2451362 (+)
G465355 NA other downstream 1950029 2405119 ~ 2406090 (+)

Expression


Co-expression Network