G464067



Basic Information


Item Value
gene id G464067
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 567650 ~ 570254 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU526869
aataaatagtagCAAAgtgattacaatttagcagattaacactggagtgagagatgagcagatgatgatgtgtaagtactggtgtgcaaaagagtagAAAGAGTAGAAAAGTAAATaagaacaatatggggatgaggtaggtagattgggtgggctatttacagatgggctgtgtccATGAGGGAGATGTAAGGACAGAAACAGCTGTATTTCCACAAGGGATAACAAATTAATCGGGCATTTTATGAGCCTCGGTGGTATCGGTGGTTATCAAAATTGGAGAGAGCTCGAACAATTTTACAACTTCATTGAGTAATTATTGTCATTCGATGtaaaaaaaattaattaaaaaaaaatactttgttTACTTGATTTGAGGTGAAGAATACAATACAgttcattagtggtggtgagtatTTGATTGTCTTAACTATCAGACATCCCAAATGGACACATTTCTACATTTGGGCGCAGGCCAGGTAGCTTGCTTCTATCCGTAATCCGTTACGCGACATTACTCAACATACTTTATTACCCAACATAACTCATTTGCATATTTTGTTTAAACCCCAGAAATGTGCAAAGTTGTTGATAATAGAAAAGTTGTTTGTCTACATTCAACTGGTAAAAGTTAATTTTGATATATTGTGAACATTTTTTAGGGTGTGGTGACTGGCCTGGTATCCTATTCAGTAGGATGGGCGGTACCCAGAAGTTCGTGTTGTAACTGGCCTGGTATGCTATTCAGTAGGATGGGCGGTACTCAGATGTTCATACTGTTCTTCTCGTCCTGGGATTTATGGTTTTACCGGCATGGCACACAAGGAGTGCAAAAGTATGCATTCTATTGTAAGAATGCTAACACAATTTGCACAAATTAATAGAGATCACACACTCTTAGCAAAATGCTAACGAGTGAAAACAAACTATATGCAAAGAGGCAAATCCAGCTTTATAAAGTTATAGAACAATAGCTAGTAGCTTCCTTATGTCATTTTCGGTGAGTGTGGACATTTACGAGCGAAAGTGAACGAGAGATAtttgcaaatgaacaaagttgtgGTGGATGCTTTtctgaaggaagagcagcatgtgtacacggagcagaggggggaagaacggaggaggaagagcagcatgtgttcACGGAGCAGAtgggaggaagagcagcatgtgttcACGGAGCAGAtgggaggaagagcagcatgtgttcACGGAGCAGAtgggaggaagagcagcatgtgtacacggagcagatgggaggaagagcagcatgtgttcAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU526869 True 1283 lncRNA 0.40 2 567650 570254

Neighbor


gene id symbol gene type direction distance location
LOC118964804 NA coding upstream 11757 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 13396 551781 ~ 554254 (+)
LOC110525138 rufy3 coding upstream 17751 442716 ~ 549899 (+)
LOC118964801 NA coding upstream 21946 543104 ~ 545704 (+)
LOC118964800 LOC105008036 coding upstream 491786 56073 ~ 77877 (+)
slc4a4a LOC101484802 coding downstream 205410 775664 ~ 1118589 (+)
LOC118964805 NA coding downstream 426775 997029 ~ 1002288 (+)
LOC110525062 LOC106570947 coding downstream 1431834 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 1578986 2149240 ~ 2199894 (+)
zfr zfr coding downstream 1788368 2342330 ~ 2451362 (+)
G464120 NA non-coding upstream 33257 533938 ~ 534393 (+)
G464092 NA non-coding upstream 112560 454317 ~ 455090 (+)
G463893 NA non-coding upstream 128728 438576 ~ 438922 (+)
G463894 NA non-coding upstream 129329 437649 ~ 438321 (+)
G463892 NA non-coding upstream 130487 436884 ~ 437163 (+)
G464126 NA non-coding downstream 23073 593327 ~ 599273 (+)
G464132 NA non-coding downstream 36143 606397 ~ 608103 (+)
G464138 NA non-coding downstream 44866 615120 ~ 615541 (+)
G464154 NA non-coding downstream 72634 642888 ~ 643281 (+)
G464155 NA non-coding downstream 74091 644345 ~ 644793 (+)
G463813 NA other upstream 299499 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 515160 43896 ~ 52580 (+)
G464705 NA other downstream 658451 1228705 ~ 1229099 (+)
G465203 NA other downstream 1492074 2062328 ~ 2064067 (+)
G465355 NA other downstream 1834865 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 2235129 2743964 ~ 2866482 (+)

Expression



Co-expression Network