G464132


Basic Information

Item Value
gene id G464132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 606397 ~ 608103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU526945
cgattcggttggccattttatgtgtggattaattgtcggagtagaggtccttgtgcatttcaggtaaaataactcaatgtttatatcccaggacaaattagctatcaacagcaagctagctaaatcggacaaattaacgttagctagcaaatgcaagaaaactagctaaattgccatacatgtttaatgattttcgacctgtccccaaattaatgtcattggttcagagtttgttttgatctttgaacctgcgtgtcgtgatcgcgtttggtgtgcgggggcaaaataaatgtatgcacgatggtgaacgcgcgcagccggtttgggttccgtgtaattAGAAGAGATTTAACTTCACTCAACcttctagagcagtggtcaccaaccggtcgatcacGATCCACTGGtccatctccaaggcattcctagtcgatcgcgATCCACTGGTCCATCTCCAAGGCATCCCTAGTCGATCGCGATCCACTGGtccatctccaaggcattcctagtcgatcgcgATCCACTGGtccatctccaaggcattcctagtcgatcgcgATCCACTGGTCCATCTTCAAAgcatactatcaagagcagtggtactagacagagcagtgatactatccagagtagtgatactatccagaacagtgatactagtagtgatactatccagagcagtgatactatccagagtagtgatactatccagagcagtgatactatccagagcagtgatactatccagagcagtgatactatccagagcagtgatactatccagagcagtgatactatcagagtagtgatactatccagagcagtgatactatccagagcagtgatactatccagagcagtgatgcaagtagtgatactatccagagcagtgatactatccagagtagtgatactagcagtgatactatccagagcagtgatactag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU526945 True 947 lncRNA 0.45 3 606397 608103

Neighbor

gene id symbol gene type direction distance location
tars1 LOC106585996 coding upstream 3878 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 50504 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 52143 551781 ~ 554254 (+)
LOC110525138 rufy3 coding upstream 56498 442716 ~ 549899 (+)
LOC118964801 NA coding upstream 60693 543104 ~ 545704 (+)
slc4a4a LOC101484802 coding downstream 167561 775664 ~ 1118589 (+)
LOC118964805 NA coding downstream 388926 997029 ~ 1002288 (+)
LOC110525062 LOC106570947 coding downstream 1393985 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 1541137 2149240 ~ 2199894 (+)
zfr zfr coding downstream 1750519 2342330 ~ 2451362 (+)
G464126 NA non-coding upstream 7124 593327 ~ 599273 (+)
G464067 NA non-coding upstream 36143 567650 ~ 570254 (+)
G464120 NA non-coding upstream 72004 533938 ~ 534393 (+)
G464092 NA non-coding upstream 151307 454317 ~ 455090 (+)
G463893 NA non-coding upstream 167475 438576 ~ 438922 (+)
G464138 NA non-coding downstream 7017 615120 ~ 615541 (+)
G464154 NA non-coding downstream 34785 642888 ~ 643281 (+)
G464155 NA non-coding downstream 36242 644345 ~ 644793 (+)
G464157 NA non-coding downstream 38420 646523 ~ 646809 (+)
G464178 NA non-coding downstream 110114 718217 ~ 725668 (+)
G463813 NA other upstream 338246 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 553907 43896 ~ 52580 (+)
G464705 NA other downstream 620602 1228705 ~ 1229099 (+)
G465203 NA other downstream 1454225 2062328 ~ 2064067 (+)
G465355 NA other downstream 1797016 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 2197280 2743964 ~ 2866482 (+)

Expression


Co-expression Network