G464138


Basic Information

Item Value
gene id G464138
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 615120 ~ 615541 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU526954
CACCAGACAACCCAGTCACACCAGATAATCCAGTCACACCAGATAATCCAGTCACACCAGACAACCCAGTCACACCAGATAATCCAGTCACACCAGACAACCCAGTCACACCAGATAATCCAGTCACACCAGATAATCCAGTCACACCAGACAACCCAGTCACACCAGATAATCCAGTCACACCAGACAACCCAGTCACACCAGATAATCCAGTCACACCAGACAACCCAGTCACACCAGACAACCCAGTCACACCAGAC

Function

NR:

description
collagen alpha-1(XXI) chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU526954 True 260 lncRNA 0.50 2 615120 615541

Neighbor

gene id symbol gene type direction distance location
tars1 LOC106585996 coding upstream 12601 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 59227 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 60866 551781 ~ 554254 (+)
LOC110525138 rufy3 coding upstream 65221 442716 ~ 549899 (+)
slc4a4a LOC101484802 coding downstream 160123 775664 ~ 1118589 (+)
LOC118964805 NA coding downstream 381488 997029 ~ 1002288 (+)
LOC110525062 LOC106570947 coding downstream 1386547 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 1533699 2149240 ~ 2199894 (+)
zfr zfr coding downstream 1743081 2342330 ~ 2451362 (+)
G464132 NA non-coding upstream 7017 606397 ~ 608103 (+)
G464126 NA non-coding upstream 15847 593327 ~ 599273 (+)
G464067 NA non-coding upstream 44866 567650 ~ 570254 (+)
G464120 NA non-coding upstream 80727 533938 ~ 534393 (+)
G464092 NA non-coding upstream 160030 454317 ~ 455090 (+)
G464154 NA non-coding downstream 27347 642888 ~ 643281 (+)
G464155 NA non-coding downstream 28804 644345 ~ 644793 (+)
G464157 NA non-coding downstream 30982 646523 ~ 646809 (+)
G464178 NA non-coding downstream 102676 718217 ~ 725668 (+)
G464179 NA non-coding downstream 111064 726605 ~ 730966 (+)
G463813 NA other upstream 346969 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 562630 43896 ~ 52580 (+)
G464705 NA other downstream 613164 1228705 ~ 1229099 (+)
G465203 NA other downstream 1446787 2062328 ~ 2064067 (+)
G465355 NA other downstream 1789578 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 2189842 2743964 ~ 2866482 (+)

Expression


Co-expression Network