G464154


Basic Information

Item Value
gene id G464154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 642888 ~ 643281 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU526973
ggaggagagacaaggggagtcaaaacacaccacgtatttaccctggaggagagacaaggggagtcaaaacacaccacgtatttaccctggaggagagaccaggggagtcaaaacacaccacgtatttaccctggaggagagaccaggggagtCAAAACACACCACGTATATATcctggaggagagaccagaggggTCAACTGAgggtagaggtagggggacaTGTATATTGCTACACTAATATTACATGACTTCCCACCAGGGTCATTAAATTACATGACTTCCCACCAGGGTCATTAAATTACATGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU526973 True 309 lncRNA 0.48 2 642888 643281

Neighbor

gene id symbol gene type direction distance location
tars1 LOC106585996 coding upstream 40369 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 86995 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 88634 551781 ~ 554254 (+)
LOC110525138 rufy3 coding upstream 92989 442716 ~ 549899 (+)
slc4a4a LOC101484802 coding downstream 132383 775664 ~ 1118589 (+)
LOC118964805 NA coding downstream 353748 997029 ~ 1002288 (+)
LOC110525062 LOC106570947 coding downstream 1358807 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 1505959 2149240 ~ 2199894 (+)
zfr zfr coding downstream 1715341 2342330 ~ 2451362 (+)
G464138 NA non-coding upstream 27347 615120 ~ 615541 (+)
G464132 NA non-coding upstream 34785 606397 ~ 608103 (+)
G464126 NA non-coding upstream 43615 593327 ~ 599273 (+)
G464067 NA non-coding upstream 72634 567650 ~ 570254 (+)
G464120 NA non-coding upstream 108495 533938 ~ 534393 (+)
G464155 NA non-coding downstream 1064 644345 ~ 644793 (+)
G464157 NA non-coding downstream 3242 646523 ~ 646809 (+)
G464178 NA non-coding downstream 74936 718217 ~ 725668 (+)
G464179 NA non-coding downstream 83324 726605 ~ 730966 (+)
G464205 NA non-coding downstream 158687 801968 ~ 802183 (+)
G463813 NA other upstream 374737 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 590398 43896 ~ 52580 (+)
G464705 NA other downstream 585424 1228705 ~ 1229099 (+)
G465203 NA other downstream 1419047 2062328 ~ 2064067 (+)
G465355 NA other downstream 1761838 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 2162102 2743964 ~ 2866482 (+)

Expression


Co-expression Network