XLOC_000024 (dre-mir-155)


Basic Information

Item Value
gene id XLOC_000024
gene name dre-mir-155
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 576444 ~ 576521 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000053
TGGTGCAGGTTTAATGCTAATCGTGATAGGGGTTTAGTGCTGATGAACACCTATGCTGTTAGCATTAATCTTGCGCTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000081781

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000053 True 78 miRNA 0.42 1 576444 576521

Neighbor

gene id symbol gene type direction distance location
XLOC_000022 mrpl16 coding upstream 44015 524388 ~ 532429 (+)
XLOC_000021 txnl4b coding upstream 58368 513986 ~ 518076 (+)
XLOC_000020 blzf1 coding upstream 70824 494297 ~ 505620 (+)
XLOC_000019 tpp2 coding upstream 132685 418869 ~ 443759 (+)
XLOC_000018 NA coding upstream 217882 355481 ~ 358562 (+)
XLOC_000025 jam2a coding downstream 18063 594584 ~ 608247 (+)
XLOC_000026 NA coding downstream 218455 794976 ~ 911551 (+)
XLOC_000027 n6amt1 coding downstream 385086 961607 ~ 970951 (+)
XLOC_000028 NA coding downstream 439291 1015812 ~ 1033638 (+)
XLOC_000029 CR450787.2 coding downstream 642170 1218691 ~ 1218805 (+)
XLOC_000011 NA non-coding upstream 419162 156792 ~ 157282 (+)
XLOC_000030 NA non-coding downstream 738768 1315289 ~ 1342237 (+)
XLOC_000031 NA non-coding downstream 782210 1358731 ~ 1360831 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G603 NA non-coding NC_056699.1 CM032068.1 2245339 ~ 2246590 (-)