G464699


Basic Information

Item Value
gene id G464699
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1200899 ~ 1201218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU527657
ctaatcaaatcaaatcaaatgtatttatatagcccttcttacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctatgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagcatggtcgaataataataaggcagaacagttgaaactggagcagca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527657 True 320 lncRNA 0.44 1 1200899 1201218

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 82310 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 198611 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 598380 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 645006 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 646645 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 800870 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 948022 2149240 ~ 2199894 (+)
zfr zfr coding downstream 1157404 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 1209013 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 1265256 2466474 ~ 2489239 (+)
G464368 NA non-coding upstream 20084 1180200 ~ 1180815 (+)
G464309 NA non-coding upstream 140497 1059846 ~ 1060402 (+)
G464295 NA non-coding upstream 158309 1041322 ~ 1042590 (+)
G464282 NA non-coding upstream 178312 1021815 ~ 1022587 (+)
G464702 NA non-coding downstream 25148 1226366 ~ 1226831 (+)
G464715 NA non-coding downstream 46677 1247895 ~ 1248126 (+)
G464739 NA non-coding downstream 76466 1277684 ~ 1278043 (+)
G464772 NA non-coding downstream 111122 1312340 ~ 1312555 (+)
G464773 NA non-coding downstream 111984 1313202 ~ 1313430 (+)
LOC110525138 rufy3 other upstream 741893 442716 ~ 549899 (+)
G463813 NA other upstream 932748 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1148409 43896 ~ 52580 (+)
G464705 NA other downstream 27487 1228705 ~ 1229099 (+)
G465203 NA other downstream 861110 2062328 ~ 2064067 (+)
G465355 NA other downstream 1203901 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1604165 2743964 ~ 2866482 (+)

Expression


Co-expression Network