G464773


Basic Information

Item Value
gene id G464773
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1313202 ~ 1313430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU527731
CTCCCACccttagctctgacaaattgaataccctagtcattggcaactccattacccgcagtattagacttaaaacgaatcatccagcgatcatacactgtttatcagggggcagggctaccgacgttaaggctaatctgaagatggtgctggctaaggctaaaactggcgagtgtagagggatattgttatccacgtctttaccaatgatgttaggatgaaacagtta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527731 True 229 lncRNA 0.45 1 1313202 1313430

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 194613 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 310914 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 710683 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 757309 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 758948 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 688658 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 835810 2149240 ~ 2199894 (+)
zfr zfr coding downstream 1045192 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 1096801 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 1153044 2466474 ~ 2489239 (+)
G464772 NA non-coding upstream 647 1312340 ~ 1312555 (+)
G464739 NA non-coding upstream 35159 1277684 ~ 1278043 (+)
G464715 NA non-coding upstream 65076 1247895 ~ 1248126 (+)
G464702 NA non-coding upstream 86371 1226366 ~ 1226831 (+)
G464699 NA non-coding upstream 111984 1200899 ~ 1201218 (+)
G464775 NA non-coding downstream 4401 1317831 ~ 1318070 (+)
G464794 LOC106585999 non-coding downstream 32766 1346196 ~ 1348337 (+)
G464795 NA non-coding downstream 35426 1348856 ~ 1354485 (+)
G464815 NA non-coding downstream 74399 1387829 ~ 1392798 (+)
G464816 NA non-coding downstream 78218 1391648 ~ 1396967 (+)
G464705 NA other upstream 84103 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 854196 442716 ~ 549899 (+)
G463813 NA other upstream 1045051 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1260712 43896 ~ 52580 (+)
G465203 NA other downstream 748898 2062328 ~ 2064067 (+)
G465355 NA other downstream 1091689 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1491953 2743964 ~ 2866482 (+)
G465578 NA other downstream 1665412 2978842 ~ 2982425 (+)

Expression


Co-expression Network