G464875


Basic Information

Item Value
gene id G464875
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1408975 ~ 1409255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU527872
ttatttttatttcacctttatttaaccaggtaggctagttgagaacaagttctcatttgcaactgcgacctggccaagataaagcgtagcagttcgacacaaacaacaacacagagttacacatggagtaaacaaaacacacagtcaataatacagtagaacaaaagaaaacaaaaagtctatatacagtgagtgcaaatgaggtaagttaaggaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527872 True 216 lncRNA 0.36 2 1408975 1409255

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 290386 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 406687 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 806456 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 853082 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 854721 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 592833 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 739985 2149240 ~ 2199894 (+)
zfr zfr coding downstream 949367 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 1000976 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 1057219 2466474 ~ 2489239 (+)
G464871 NA non-coding upstream 4174 1404522 ~ 1404801 (+)
G464868 NA non-coding upstream 6760 1401977 ~ 1402215 (+)
G464863 NA non-coding upstream 8905 1399708 ~ 1400070 (+)
G464816 NA non-coding upstream 12008 1391648 ~ 1396967 (+)
G464815 NA non-coding upstream 16177 1387829 ~ 1392798 (+)
G464876 NA non-coding downstream 126 1409381 ~ 1409926 (+)
G464901 NA non-coding downstream 13152 1422407 ~ 1430552 (+)
G464902 NA non-coding downstream 13333 1422588 ~ 1423475 (+)
G464903 NA non-coding downstream 16800 1426055 ~ 1427835 (+)
G464907 NA non-coding downstream 22383 1431638 ~ 1432014 (+)
G464705 NA other upstream 179876 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 949969 442716 ~ 549899 (+)
G463813 NA other upstream 1140824 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1356485 43896 ~ 52580 (+)
G465203 NA other downstream 653073 2062328 ~ 2064067 (+)
G465355 NA other downstream 995864 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1396128 2743964 ~ 2866482 (+)
G465578 NA other downstream 1569587 2978842 ~ 2982425 (+)

Expression


Co-expression Network