G464967


Basic Information

Item Value
gene id G464967
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1554057 ~ 1555803 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU527976
atgttctctgttttgtgagtcctccagatcagaggcagtagtgatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagtgatgaccagggatgttctctgtttagtgagtccaccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagtgatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagtgatgaccagggatgttctctgtttagtgagtcctcctgatcagaggcagtagagatgaccagggatgttctctgtttagtgagtcctccagatcagagacagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagagacagtagggatgatcagcgatgttctctgtttagtgagtcctccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagagacagtagggatgaccagcgatgttctctgtttagtgagtcctccagatcagaggcagtagggaggaccagtgatgttctctgtttagttagtcctccagatcagaggcagtagggataaccaaagttgttctctgttttgtgagtcctccagatcagaggcaatagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggcaataggatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtgtggatgaccagggatgttctctgtttagttagtcctccagatcagaggcagtagtgatgaccagggatgttctctgtttagttagtcatccagatcagaggcaatagggatgaccagggatgttctctgttttgtgagtcctccagatcagagttagtagggataaccaaggatgttctctgtttagtgagtcatccagatcagaggcagtagggatgtttagtgagtccaccagatcagaatcagtacagattaccagtgatgttcactgtttagtgagtactctagatcagaggcagtatgatgacgagggatgttctctgtttagtgagtcctccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtaggaacgaccagtgatgtcctctgtttagtgaatcctcaagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtccaccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggatgaccagtgatgttctctgtttagtgagtccaccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtcctcaagatcagcggcagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagtgatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagtgatgaccagggatgttctctgtttagtgagtcctcctgatcagaggcagtagagatgaccagggatgttctctgtttagtgagtcctccagatcagagacagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagagacagtagggatgatcagcgatgttctctgtttagtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527976 True 1747 lncRNA 0.48 1 1554057 1555803

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 435468 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 551769 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 951538 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 998164 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 999803 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 446285 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 593437 2149240 ~ 2199894 (+)
zfr zfr coding downstream 802819 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 854428 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 910671 2466474 ~ 2489239 (+)
G464965 NA non-coding upstream 2834 1551006 ~ 1551223 (+)
G464945 NA non-coding upstream 56182 1497651 ~ 1497875 (+)
G464914 NA non-coding upstream 90548 1463146 ~ 1463509 (+)
G464913 NA non-coding upstream 91580 1461139 ~ 1462477 (+)
G464907 NA non-coding upstream 122043 1431638 ~ 1432014 (+)
G464969 NA non-coding downstream 1932 1557735 ~ 1653335 (+)
G464979 NA non-coding downstream 44696 1600499 ~ 1602013 (+)
G464989 NA non-coding downstream 65609 1621412 ~ 1622041 (+)
G464973 NA non-coding downstream 76563 1632366 ~ 1632629 (+)
G464999 NA non-coding downstream 77727 1633530 ~ 1633915 (+)
G464705 NA other upstream 324958 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1095051 442716 ~ 549899 (+)
G463813 NA other upstream 1285906 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1501567 43896 ~ 52580 (+)
G465203 NA other downstream 506525 2062328 ~ 2064067 (+)
G465355 NA other downstream 849316 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1249580 2743964 ~ 2866482 (+)
G465578 NA other downstream 1423039 2978842 ~ 2982425 (+)

Expression

G464967 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G464967 Expression in each Bioproject

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G464967 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network