G464989


Basic Information

Item Value
gene id G464989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1621412 ~ 1622041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU528054
GGGTATTACTACTGGGACCAGCTGGGTATTACTACAGGGACCAGCTGGGTATTACTACAGGGACCAGCTGGGTATTACTACAGGGACCAGCTGGGTATTACTACTGGGACCAGCTGGGTATTACTACTGGGACCAGCTGGGTATTACTACTGGGACCAGCTGGGTATTACTACTGGGACCAGCTGGGTATTACTACAGGGACCAGCTGGGTATTACTACAGGGACCAGCTGGGTATTACTACAGGGACCAGCTGGGTATTACTACTGGGACCAGCTGGGTATTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528054 True 285 lncRNA 0.52 2 1621412 1622041

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 502823 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 619124 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 1018893 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 1065519 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 1067158 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 380047 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 527199 2149240 ~ 2199894 (+)
zfr zfr coding downstream 736581 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 788190 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 844433 2466474 ~ 2489239 (+)
G464979 NA non-coding upstream 19399 1600499 ~ 1602013 (+)
G464967 NA non-coding upstream 65609 1554057 ~ 1555803 (+)
G464965 NA non-coding upstream 70189 1551006 ~ 1551223 (+)
G464945 NA non-coding upstream 123537 1497651 ~ 1497875 (+)
G464914 NA non-coding upstream 157903 1463146 ~ 1463509 (+)
G464973 NA non-coding downstream 10325 1632366 ~ 1632629 (+)
G464999 NA non-coding downstream 11489 1633530 ~ 1633915 (+)
G465025 NA non-coding downstream 59586 1681627 ~ 1685862 (+)
G465026 NA non-coding downstream 60440 1682481 ~ 1686137 (+)
G465027 NA non-coding downstream 61802 1683843 ~ 1684926 (+)
G464705 NA other upstream 392313 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1162406 442716 ~ 549899 (+)
G463813 NA other upstream 1353261 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1568922 43896 ~ 52580 (+)
G465203 NA other downstream 440287 2062328 ~ 2064067 (+)
G465355 NA other downstream 783078 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1183342 2743964 ~ 2866482 (+)
G465578 NA other downstream 1356801 2978842 ~ 2982425 (+)

Expression


Co-expression Network