G465026


Basic Information

Item Value
gene id G465026
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1682481 ~ 1686137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU528097
gttgttgttaacaggtagttgttgttaacaggttgttgttgttaacaggttgttgttaacaggttgttgttgttaacaggttgttgttaacaggttgttgttgttaacaggtagttgttgttaacaggttgttgttgttaacaggttgttgttaacaggttgttgttgttaacaggttgttgttgttaacaggttgttgttaacaagttgttgttgttaacaggttgttgctAATAAGGATCAGCACCAATTTCCTCCTAAAATGACAAACCCAAATCTAACcacctgtagctcaggacctgaagcaaggatatgcatattcttggtaccatttgaaaggaaacactttgaagtttgtggaaatgtgaaatgaatgtaggagaataaaacacattagatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528097 True 400 lncRNA 0.36 3 1682481 1686137

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 563892 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 680193 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 1079962 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 1126588 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 1128227 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 315951 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 463103 2149240 ~ 2199894 (+)
zfr zfr coding downstream 672485 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 724094 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 780337 2466474 ~ 2489239 (+)
G464969 NA non-coding upstream 29146 1557735 ~ 1653335 (+)
G464999 NA non-coding upstream 48566 1633530 ~ 1633915 (+)
G464973 NA non-coding upstream 49852 1632366 ~ 1632629 (+)
G464989 NA non-coding upstream 60440 1621412 ~ 1622041 (+)
G464979 NA non-coding upstream 80468 1600499 ~ 1602013 (+)
G465056 NA non-coding downstream 77647 1763784 ~ 1764159 (+)
G465077 NA non-coding downstream 139959 1826096 ~ 1827128 (+)
G465080 NA non-coding downstream 143231 1829368 ~ 1830635 (+)
G465086 NA non-coding downstream 155823 1841960 ~ 1865064 (+)
G465119 NA non-coding downstream 237576 1923713 ~ 1924820 (+)
G464705 NA other upstream 453382 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1223475 442716 ~ 549899 (+)
G463813 NA other upstream 1414330 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1629991 43896 ~ 52580 (+)
G465203 NA other downstream 376191 2062328 ~ 2064067 (+)
G465355 NA other downstream 718982 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1119246 2743964 ~ 2866482 (+)
G465578 NA other downstream 1292705 2978842 ~ 2982425 (+)

Expression


Co-expression Network