G465027


Basic Information

Item Value
gene id G465027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1683843 ~ 1684926 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU528099
ttgttgttgttaacaggttgttgttaacaggtagttgttgttaacaggttgttgttaacaggttgttgttgttaacaggttgttgttgttaacaggtagttgttaacaggttgttgttaacaggttgttgttgttaacaggttgttgttgttaacaggttgttgttaacaggtagttgttaacaggttgttgttgttaacagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528099 True 203 lncRNA 0.35 2 1683843 1684926

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 565254 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 681555 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 1081324 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 1127950 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 1129589 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 317162 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 464314 2149240 ~ 2199894 (+)
zfr zfr coding downstream 673696 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 725305 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 781548 2466474 ~ 2489239 (+)
G464969 NA non-coding upstream 30508 1557735 ~ 1653335 (+)
G464999 NA non-coding upstream 49928 1633530 ~ 1633915 (+)
G464973 NA non-coding upstream 51214 1632366 ~ 1632629 (+)
G464989 NA non-coding upstream 61802 1621412 ~ 1622041 (+)
G464979 NA non-coding upstream 81830 1600499 ~ 1602013 (+)
G465056 NA non-coding downstream 78858 1763784 ~ 1764159 (+)
G465077 NA non-coding downstream 141170 1826096 ~ 1827128 (+)
G465080 NA non-coding downstream 144442 1829368 ~ 1830635 (+)
G465086 NA non-coding downstream 157034 1841960 ~ 1865064 (+)
G465119 NA non-coding downstream 238787 1923713 ~ 1924820 (+)
G464705 NA other upstream 454744 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1224837 442716 ~ 549899 (+)
G463813 NA other upstream 1415692 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1631353 43896 ~ 52580 (+)
G465203 NA other downstream 377402 2062328 ~ 2064067 (+)
G465355 NA other downstream 720193 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1120457 2743964 ~ 2866482 (+)
G465578 NA other downstream 1293916 2978842 ~ 2982425 (+)

Expression


Co-expression Network