G465056


Basic Information

Item Value
gene id G465056
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1763784 ~ 1764159 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU528131
ggatcatccagatggtcattggcaaacttcagacgggcctggacatgcgctagcttgagcagggggaccttgcgtgcgctgcaggattttaatccacgacgtcgtagtgtgttactaatggttttatttgtcacgtgctccgtatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtggtagacatcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacagaaatgcctacttacaagcccttaaccaaccatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528131 True 338 lncRNA 0.45 2 1763784 1764159

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 645195 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 761496 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 1161265 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 1207891 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 1209530 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 237929 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 385081 2149240 ~ 2199894 (+)
zfr zfr coding downstream 594463 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 646072 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 702315 2466474 ~ 2489239 (+)
G465026 NA non-coding upstream 77647 1682481 ~ 1686137 (+)
G465025 NA non-coding upstream 77922 1681627 ~ 1685862 (+)
G465027 NA non-coding upstream 78858 1683843 ~ 1684926 (+)
G464969 NA non-coding upstream 110449 1557735 ~ 1653335 (+)
G464999 NA non-coding upstream 129869 1633530 ~ 1633915 (+)
G465077 NA non-coding downstream 61937 1826096 ~ 1827128 (+)
G465080 NA non-coding downstream 65209 1829368 ~ 1830635 (+)
G465086 NA non-coding downstream 77801 1841960 ~ 1865064 (+)
G465119 NA non-coding downstream 159554 1923713 ~ 1924820 (+)
G465145 NA non-coding downstream 195111 1959270 ~ 1961473 (+)
G464705 NA other upstream 534685 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1304778 442716 ~ 549899 (+)
G463813 NA other upstream 1495633 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1711294 43896 ~ 52580 (+)
G465203 NA other downstream 298169 2062328 ~ 2064067 (+)
G465355 NA other downstream 640960 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1041224 2743964 ~ 2866482 (+)
G465578 NA other downstream 1214683 2978842 ~ 2982425 (+)

Expression


Co-expression Network