G465086


Basic Information

Item Value
gene id G465086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1841960 ~ 1865064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU528164
tctgtggacaggtgtcttttatacaggtaacaaactgagattaggagcactccctttaagagtgtgctcctaatctcagctcgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccactcactctccactctccactcagagccagaaatctttctgattgagagggggtcaaatacttatttccctcattaaaatgcaaatcaacttataacatttttgacatgtgtttttttctgtatatatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528164 True 273 lncRNA 0.39 2 1841960 1865064

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 723371 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 839672 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 1239441 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 1286067 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 1287706 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 137024 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 284176 2149240 ~ 2199894 (+)
zfr zfr coding downstream 493558 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 545167 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 601410 2466474 ~ 2489239 (+)
G465080 NA non-coding upstream 11325 1829368 ~ 1830635 (+)
G465077 NA non-coding upstream 14832 1826096 ~ 1827128 (+)
G465056 NA non-coding upstream 77801 1763784 ~ 1764159 (+)
G465026 NA non-coding upstream 155823 1682481 ~ 1686137 (+)
G465025 NA non-coding upstream 156098 1681627 ~ 1685862 (+)
G465119 NA non-coding downstream 58649 1923713 ~ 1924820 (+)
G465145 NA non-coding downstream 94206 1959270 ~ 1961473 (+)
G465202 NA non-coding downstream 194907 2059971 ~ 2060253 (+)
G465222 NA non-coding downstream 248826 2113890 ~ 2116021 (+)
G465248 NA non-coding downstream 309859 2174923 ~ 2175439 (+)
G464705 NA other upstream 612861 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1382954 442716 ~ 549899 (+)
G463813 NA other upstream 1573809 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1789470 43896 ~ 52580 (+)
G465203 NA other downstream 197264 2062328 ~ 2064067 (+)
G465355 NA other downstream 540055 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 940319 2743964 ~ 2866482 (+)
G465578 NA other downstream 1113778 2978842 ~ 2982425 (+)

Expression


Co-expression Network