G465261


Basic Information

Item Value
gene id G465261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 2197743 ~ 2198832 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU528384
ACAGACATGACATCTATAGGGGGAATACAGACATGACATCTATAGGGGGAATACAGACATGACAGGCTATAGtgggaatacagacatgacaTCTATAGGGGGAATACAGACATGACAGCTATAGGGGGAATACAGACATGACATCTATAGGGGGAATACAGACATGACATATATAGGAATACAGACATGCCATCTATAGGGGGAAAACAGACATGACATCTATAGGAATACAGACATGACATCTATAGGGGGAATACAGACATCTATAGGGGGAAAACAGACATGACATCTATAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528384 True 296 lncRNA 0.42 2 2197743 2198832

Neighbor

gene id symbol gene type direction distance location
LOC110525062 LOC106570947 coding upstream 92602 2002088 ~ 2105141 (+)
slc4a4a LOC101484802 coding upstream 1079154 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 1195455 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 1595224 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 1641850 555164 ~ 555893 (+)
zfr zfr coding downstream 159790 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 211399 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 267642 2466474 ~ 2489239 (+)
pdzd2 pdzd2 coding downstream 354379 2553211 ~ 2714300 (+)
LOC110516346 NA coding downstream 524933 2723765 ~ 2724931 (+)
G465248 NA non-coding upstream 22304 2174923 ~ 2175439 (+)
G465222 NA non-coding upstream 81722 2113890 ~ 2116021 (+)
G465202 NA non-coding upstream 137490 2059971 ~ 2060253 (+)
G465145 NA non-coding upstream 236270 1959270 ~ 1961473 (+)
G465119 NA non-coding upstream 272923 1923713 ~ 1924820 (+)
G465141 NA non-coding downstream 3539 2202371 ~ 2203051 (+)
G465263 NA non-coding downstream 7169 2206001 ~ 2206458 (+)
G465266 NA non-coding downstream 11241 2210073 ~ 2210280 (+)
G465277 NA non-coding downstream 28384 2227216 ~ 2227430 (+)
G465285 NA non-coding downstream 35373 2234205 ~ 2234432 (+)
G465203 NA other upstream 133676 2062328 ~ 2064067 (+)
G464705 NA other upstream 968644 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1738737 442716 ~ 549899 (+)
G463813 NA other upstream 1929592 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 2145253 43896 ~ 52580 (+)
G465355 NA other downstream 206287 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 606551 2743964 ~ 2866482 (+)
G465578 NA other downstream 780010 2978842 ~ 2982425 (+)
G466813 NA other downstream 1574032 3772864 ~ 3773340 (+)

Expression


Co-expression Network