XLOC_024011 (PYURF)


Basic Information

Item Value
gene id XLOC_024011
gene name PYURF
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 17847054 ~ 17849574 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047658
TTCCAGACGCACCGCCACCGATTGCAGCGCTTCCGGTTCACCAAAAGCGTGAAATAAGTTGAGCTTTCAGCGCACCTCTGTCGTCGGACATGTCTCATGTTTTGAGGACTCTTGGCACAGGAGTTTTGGCCGTTCAAAGATCAGTGTCCGCCGTGCAGCTCCTGAAGGTCGGCGCTCTGCAAAGGAGTTGCTGTGATGCAGTGAAGGACAGCCAGAGTCCGCCGTTTGACGAGGCCCTGCTGGAGGTCCTGGTGTGTCCGCTGTCCAAAAAACCACTCAGGTACGACGGAAGCAGCAACGAACTGATAAACGAAGAGCTTGGCATCGCATACCCCATCATTGATGGCATTCCTAACATGATCCCACAAGACGCACGAATGATCCACAAGACCAAAGCACCCGAAAAACCCTCAGAGTCATAACTCAGATTTgccattaattatttattttccacCACAATGTTTTTCTCCCTATCAACAGTGACTGTACTTGTGCCACTTATATCTTTAACTGGACTGTTTTACTCTGCAGCTGTGGATGAGAATTTCCCACAAGGCTGCACGAGTGCAAGCAGCATCTGTTTTTACAGCCTGCTTTTGCCCGTAACTATTcctgtgtatgtgttttttcacCTTTGGAAGTGGATGGGAATCAAATTATTTAGACACAATTGATTTCCTTCCACCTTTTAATTATGAACAAAACTTGCTTGTAAACAACGGACACTGAAGATGTAGTCAAGAACATTTACCTTGAAGCAAACGCTGAGGTGAACGATGTTTAATACAGAATAAAACTGCGAATGTTAAA
>TCONS_00047659
ATGTTTTTCTCCCTATCAACAGTGACTGTACTTGTGCCACTTATATCTTTAACTGGACTGTTTTACTCTGCAGCTGTGGATGAGAATTTCCCACAAGGCTGCACGAGTGCAAGCAGCATCTGTTTTTACAGCCTGCTTTTGCCCGTAACTATTcctgtgtatgtgttttttcacCTTTGGAAGTGGATGGGAATCAAATTATTTAGACACAAT

Function

symbol description
pyurf Involved in GPI anchor biosynthetic process and positive regulation of metabolic process. Located in endoplasmic reticulum membrane. Part of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000045773

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047658 False 810 mRNA 0.46 2 17847054 17849574
TCONS_00047659 True 213 mRNA 0.41 1 17849223 17849435

Neighbor

gene id symbol gene type direction distance location
XLOC_024010 galnt18a coding upstream 21540 17689565 ~ 17825514 (+)
XLOC_024009 vac14 coding upstream 234029 17589906 ~ 17613025 (+)
XLOC_024008 NA coding upstream 311138 17528781 ~ 17535916 (+)
XLOC_024007 NA coding upstream 336635 17502996 ~ 17510419 (+)
XLOC_024006 elmo3 coding upstream 375794 17423515 ~ 17471260 (+)
XLOC_024012 pth1a coding downstream 11224 17860798 ~ 17861696 (+)
XLOC_024013 btbd10a coding downstream 12764 17862338 ~ 17892830 (+)
XLOC_024014 borcs5 coding downstream 70787 17920361 ~ 17925146 (+)
XLOC_024015 C25H12orf29 coding downstream 75850 17925424 ~ 17934675 (+)
XLOC_024016 tmtc3 coding downstream 152794 18002368 ~ 18055064 (+)
XLOC_023973 CR762411.1 misc upstream 2628945 15217824 ~ 15218109 (+)
XLOC_024002 NA non-coding upstream 886553 16958172 ~ 16960501 (+)
XLOC_023998 NA non-coding upstream 1010105 16829884 ~ 16836949 (+)
XLOC_023997 BX004976.1 non-coding upstream 1075146 16771791 ~ 16771908 (+)
XLOC_024017 BX901919.1 non-coding downstream 248173 18097747 ~ 18097861 (+)
XLOC_024018 NA non-coding downstream 257818 18107392 ~ 18250076 (+)
XLOC_024019 NA non-coding downstream 459741 18309315 ~ 18314927 (+)
XLOC_024020 NA non-coding downstream 509454 18359028 ~ 18361288 (+)
XLOC_024027 NA non-coding downstream 894447 18744021 ~ 18745029 (+)

Expression


Co-expression Network